Basic information
Locus name	AT5G57950
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Signal transduction
Effect for Senescence	unclear
Gene Description	26S proteasome regulatory subunit, putative; FUNCTIONS IN: protein binding; INVOLVED IN: intracellular signaling cascade; LOCATED IN: proteasome regulatory particle; EXPRESSED IN: 21 plant structures;
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	molecular function protein binding
Sequence	AT5G57950.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_128010	Accession Taxon NP_568872 ( AT5G57950 ) Arabidopsis thaliana CMR331C Cyanidioschyzon merolae strain 10D CMT052C Cyanidioschyzon merolae strain 10D 115832 Chlamydomonas reinhardtii ACO65899 Micromonas sp. RCC299 NP_001063197 Oryza sativa Japonica Group 1500010291 Ostreococcus tauri 1500010292 Ostreococcus tauri e_gw1.15.412.1 Physcomitrella patens subsp. patens e_gw1.35.321.1 Physcomitrella patens subsp. patens 29687.m000565 Ricinus communis e_gw1.5.423.1 Thalassiosira pseudonana CCMP1335 XP_002951978 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR12651 1.8E-81 1 227 No hit NA Coils Coil NA 59 80 No hit NA SMART SM00228 1.6E-4 122 202 IPR001478 PDZ domain ProSiteProfiles PS50106 10.3 125 202 IPR001478 PDZ domain Pfam PF13180 2.7E-8 144 210 IPR001478 PDZ domain SUPERFAMILY SSF50156 6.4E-10 144 224 IPR001478 PDZ domain