Basic information
Locus name	AT3G51730
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others:Unknown
Effect for Senescence	Unclear
Gene Description	saposin B domain-containing protein
Evidence	Molecular evidence: SSH and Northern [Ref 1]
References	1: Gepstein S, Sabehi G, Carp MJ, Hajouj T, Nesher MF, Yariv I, Dor C, Bassani M Large-scale identification of leaf senescence-associated genes. Plant J. 2003 Dec;36(5):629-42
Gene Ontology	biological process lipid metabolic process
Sequence	AT3G51730.1 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: AT3G51730.1  miRNA: ath-miR869 miRNA: ath-miR869 mfe: -23.2 kcal/mol  p-value: 0.025790  position:  819  target 5' A    G                U 3'             GGCA CCGGAGUUG GCUGAU              UUGU GGUCUUAAC UGGUUA   miRNA  3' G              U        5'
Ortholog Group
Ortholog Groups: OG5_130508	Accession Taxon NP_190741 ( AT3G51730 ) Arabidopsis thaliana NP_195800 Arabidopsis thaliana 186862 Chlamydomonas reinhardtii 192781 Chlamydomonas reinhardtii ACO65375 Micromonas sp. RCC299 0300010405 Ostreococcus tauri gw1.68.142.1 Physcomitrella patens subsp. patens gw1.69.76.1 Physcomitrella patens subsp. patens 28297.m000109 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR11480 3.4E-84 34 207 No hit NA ProSiteProfiles PS50015 14.4 36 115 IPR008139 Saposin B Pfam PF05184 1.9E-9 38 74 IPR007856 Saposin-like type B, 1 SMART SM00741 3.5E-22 38 111 IPR008139 Saposin B SUPERFAMILY SSF47862 7.2E-16 38 113 IPR011001 Saposin-like Pfam PF03489 2.2E-8 78 111 IPR008138 Saposin-like type B, 2 ProSiteProfiles PS50015 12.0 122 202 IPR008139 Saposin B SUPERFAMILY SSF47862 3.1E-13 123 200 IPR011001 Saposin-like Pfam PF05184 3.4E-7 124 160 IPR007856 Saposin-like type B, 1 SMART SM00741 1.7E-16 124 198 IPR008139 Saposin B Pfam PF03489 1.5E-7 165 198 IPR008138 Saposin-like type B, 2
Subcellular Localization
Localization	extracellular
Evidence	SUBAcon
Pubmed ID	23180787