Basic information   
Locus name AT3G02040
AliasSRG3
OrganismArabidopsis thaliana
Taxonomic identifier[NCBI]
Function categoryLipid/Carbohydrate metabolism:lipid metabolism
Effect for SenescenceUnclear
Gene Descriptionsenescence-related gene 3 (SRG3)
EvidenceMolecular evidence: SSH and Northern [Ref 1]
References
1: Gepstein S, Sabehi G, Carp MJ, Hajouj T, Nesher MF, Yariv I, Dor C, Bassani M
Large-scale identification of leaf senescence-associated genes.
Plant J. 2003 Dec;36(5):629-42

Gene Ontology
biological process
molecular function
SequenceAT3G02040.1 | Genomic | mRNA | CDS | Protein
Microarray   
Sampling Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ.
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4)
Comparation Legends:
Col: wild type, indicates the ratio of expression in senescing leaves/green leaves.
NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type.
D/L: ratio of DARK 5d/control.
CD: Cell Death, ratio of starved cell suspension culture/control.
Genes showing at least 3 fold (ratio) up regulation during leaf senescence.
Ortholog Group      
Ortholog Groups: OG5_128954
AccessionTaxon
NP_198924Arabidopsis thaliana
NP_199144Arabidopsis thaliana
NP_566159 ( AT3G02040 ) Arabidopsis thaliana
NP_974865Arabidopsis thaliana
CMR112CCyanidioschyzon merolae strain 10D
102445Chlamydomonas reinhardtii
206119Chlamydomonas reinhardtii
ACO62504Micromonas sp. RCC299
NP_001046948Oryza sativa Japonica Group
NP_001052651Oryza sativa Japonica Group
NP_001062357Oryza sativa Japonica Group
e_gw1.107.86.1Physcomitrella patens subsp. patens
e_gw1.288.11.1Physcomitrella patens subsp. patens
e_gw1.70.77.1Physcomitrella patens subsp. patens
gw1.227.40.1Physcomitrella patens subsp. patens
29929.m004597Ricinus communis
30131.m007020Ricinus communis
XP_002950421Volvox carteri f. nagariensis
Cross Link      
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR229586.3E-1346336No hitNA
SUPERFAMILYSSF516958.9E-3832123IPR017946PLC-like phosphodiesterase, TIM beta/alpha-barrel domain
PfamPF030091.6E-6039317IPR004129Glycerophosphoryl diester phosphodiesterase
SUPERFAMILYSSF516958.9E-38152318IPR017946PLC-like phosphodiesterase, TIM beta/alpha-barrel domain