Basic information
Locus name	LOC_Os07g06950
Organism	Rice (Oryza sativa)
Taxonomic identifier	[NCBI]
Function category	Nutrient recycling:Macromolecule metabolism
Effect for Senescence	Unclear
Gene Description	Ubiquitin carboxyl-terminal hydrolase 7, putative, expressed
Evidence	Molecular evidence: SSH, Northern blot and RT-PCR [Ref 1]
References	1: Liu L, Zhou Y, Zhou G, Ye R, Zhao L, Li X, Lin Y Identification of early senescence-associated genes in rice flag leaves. Plant Mol. Biol. 2008 May;67(1-2):37-55
Gene Ontology	biological process ubiquitin-dependent protein catabolic process molecular function protein binding ubiquitin thiolesterase activity
Sequence	LOC_Os07g06950.1 | Genomic | mRNA | CDS | Protein
Cross Link
Database Entry ID E-value Start End InterPro ID Description ProSiteProfiles PS50144 36.8 128 253 IPR002083 MATH SMART SM00061 2.4E-17 130 234 IPR002083 MATH SUPERFAMILY SSF49599 5.2E-40 130 263 IPR008974 TRAF-like Pfam PF00917 7.7E-17 135 254 IPR002083 MATH PANTHER PTHR24006 2.7E-252 200 844 No hit NA ProSiteProfiles PS50235 17.0 268 579 IPR001394 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 SUPERFAMILY SSF54001 2.2E-68 268 606 No hit NA Pfam PF00443 2.1E-35 270 575 IPR001394 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 ProSitePatterns PS00973 NA 494 511 IPR018200 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site Pfam PF12436 1.3E-10 590 622 IPR024729 Peptidase C19 domain Coils Coil NA 591 619 No hit NA