Basic information
Locus name	LOC_Os09g27030
Organism	Rice (Oryza sativa)
Taxonomic identifier	[NCBI]
Function category	Others:Macromolecule metabolism
Effect for Senescence	Unclear
Gene Description	Thiol protease aleurain precursor, putative, expressed
Evidence	Molecular evidence: SSH, Northern blot and RT-PCR [Ref 1]
References	1: Liu L, Zhou Y, Zhou G, Ye R, Zhao L, Li X, Lin Y Identification of early senescence-associated genes in rice flag leaves. Plant Mol. Biol. 2008 May;67(1-2):37-55
Gene Ontology	biological process proteolysis molecular function cysteine-type peptidase activity
Sequence	LOC_Os09g27030.1 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: LOC_Os09g27030  miRNA: osa-miR393 miRNA: osa-miR393 mfe: -29.1 kcal/mol  p-value: 0.004406  position:  552  target 5' G     C          G     C 3'             GGUCA UGUGGUUCCU UUGGA              CUAGU ACGCUAGGGA AACCU   miRNA  3'       U                  5'  target: LOC_Os09g27030  miRNA: osa-miR393b miRNA: osa-miR393b mfe: -31.5 kcal/mol  p-value: 0.001635  position:  551  target 5' A      C          G     C 3'             GGGUCA UGUGGUUCCU UUGGA              UCUAGU ACGCUAGGGA AACCU   miRNA  3'        U                  5'
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR12411 4.7E-193 1 361 IPR013128 Peptidase C1A, papain SUPERFAMILY SSF54001 1.4E-110 59 360 No hit NA Pfam PF08246 9.2E-12 62 118 IPR013201 Proteinase inhibitor I29, cathepsin propeptide SMART SM00848 3.3E-19 62 118 IPR013201 Proteinase inhibitor I29, cathepsin propeptide Pfam PF00112 5.9E-79 145 360 IPR000668 Peptidase C1A, papain C-terminal SMART SM00645 4.0E-113 145 360 IPR000668 Peptidase C1A, papain C-terminal PRINTS PR00705 2.0E-10 163 178 IPR000668 Peptidase C1A, papain C-terminal ProSitePatterns PS00139 NA 163 174 IPR000169 Cysteine peptidase, cysteine active site ProSitePatterns PS00639 NA 307 317 IPR025660 Cysteine peptidase, histidine active site PRINTS PR00705 2.0E-10 309 319 IPR000668 Peptidase C1A, papain C-terminal PRINTS PR00705 2.0E-10 324 330 IPR000668 Peptidase C1A, papain C-terminal ProSitePatterns PS00640 NA 324 343 IPR025661 Cysteine peptidase, asparagine active site