Basic information
Locus name	LOC_Os11g05110
Organism	Rice (Oryza sativa)
Taxonomic identifier	[NCBI]
Function category	Others:Macromolecule metabolism
Effect for Senescence	unclear
Gene Description	Pyruvate kinase family protein, expressed
Evidence	Molecular evidence: SSH, Northern blot and RT-PCR [Ref 1]
References	1: Liu L, Zhou Y, Zhou G, Ye R, Zhao L, Li X, Lin Y Identification of early senescence-associated genes in rice flag leaves. Plant Mol. Biol. 2008 May;67(1-2):37-55
Gene Ontology	biological process glycolysis molecular function magnesium ion binding potassium ion binding pyruvate kinase activity
Pathway	KEGG map00010 (EC 2.7.1.40) map00230 (EC 2.7.1.40) map00620 (EC 2.7.1.40) map00710 (EC 2.7.1.40) MetaCyc PWY-2221 Reactome REACT_474
Sequence	LOC_Os11g05110.1 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: LOC_Os11g05110  miRNA: osa-miR168a miRNA: osa-miR168a mfe: -28.8 kcal/mol  p-value: 0.049926  position:  1317  target 5' C   G           C  U   G 3'             UCC UGGUCUGUACC AG UGA              AGG GCUAGACGUGG UC GCU   miRNA  3' C               U        5'
Ortholog Group
Ortholog Groups: OG5_140442	Accession Taxon NP_001078275 Arabidopsis thaliana NP_565850 Arabidopsis thaliana NP_566976 Arabidopsis thaliana 118203 Chlamydomonas reinhardtii ACO62715 Micromonas sp. RCC299 NP_001065749 ( LOC_Os11g05110 ) Oryza sativa Japonica Group NP_001066148 Oryza sativa Japonica Group NP_001067507 Oryza sativa Japonica Group e_gw1.114.47.1 Physcomitrella patens subsp. patens estExt_Genewise1.C_1700055 Physcomitrella patens subsp. patens estExt_fgenesh1_kg.C_120005 Physcomitrella patens subsp. patens estExt_fgenesh1_pg.C_120151 Physcomitrella patens subsp. patens 28448.m000357 Ricinus communis 29815.m000503 Ricinus communis XP_002954743 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR11817 1.5E-217 6 527 IPR001697 Pyruvate kinase SUPERFAMILY SSF51621 9.1E-75 9 101 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain Pfam PF00224 8.4E-92 30 375 IPR015793 Pyruvate kinase, barrel TIGRFAM TIGR01064 5.2E-108 30 516 IPR001697 Pyruvate kinase PRINTS PR01050 1.5E-44 85 101 IPR001697 Pyruvate kinase SUPERFAMILY SSF50800 1.4E-7 96 186 IPR011037 Pyruvate kinase-like, insert domain SUPERFAMILY SSF51621 9.1E-75 201 375 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain PRINTS PR01050 1.5E-44 221 235 IPR001697 Pyruvate kinase PRINTS PR01050 1.5E-44 253 279 IPR001697 Pyruvate kinase PRINTS PR01050 1.5E-44 280 304 IPR001697 Pyruvate kinase PRINTS PR01050 1.5E-44 329 347 IPR001697 Pyruvate kinase PRINTS PR01050 1.5E-44 348 364 IPR001697 Pyruvate kinase SUPERFAMILY SSF52935 2.0E-22 358 522 IPR015795 Pyruvate kinase, C-terminal Pfam PF02887 1.4E-21 395 523 IPR015795 Pyruvate kinase, C-terminal