Basic information
Locus name	LOC_Os01g08270
Organism	Rice (Oryza sativa)
Taxonomic identifier	[NCBI]
Function category	Others:Protein biosynthesis
Effect for Senescence	Unclear
Gene Description	Aminotransferase class I and II family protein
Evidence	Molecular evidence:SSH [Ref 1]
References	1: Liu L, Zhou Y, Zhou G, Ye R, Zhao L, Li X, Lin Y Identification of early senescence-associated genes in rice flag leaves. Plant Mol. Biol. 2008 May;67(1-2):37-55
Gene Ontology	biological process biosynthetic process molecular function catalytic activity pyridoxal phosphate binding
Pathway	Reactome REACT_13
Sequence	LOC_Os01g08270.1 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: LOC_Os01g08270  miRNA: osa-miR1851 miRNA: osa-miR1851 mfe: -28.0 kcal/mol  p-value: 0.038971  position:  670  target 5' U  U C               A 3'             CC A AUGUCAUUCCAGAUG              GG U UACGGUAGGGUCUGC   miRNA  3' C  U U                 5'
Ortholog Group
Ortholog Groups: OG5_140291	Accession Taxon NP_178152 Arabidopsis thaliana CMA077C Cyanidioschyzon merolae strain 10D 146923 Chlamydomonas reinhardtii NP_001042188 ( LOC_Os01g08270 ) Oryza sativa Japonica Group e_gw1.9.292.1 Physcomitrella patens subsp. patens 29841.m002756 Ricinus communis fgenesh1_pg.C_bd_20x5000021 Thalassiosira pseudonana CCMP1335 XP_002948580 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR11751 1.4E-263 7 393 No hit NA SUPERFAMILY SSF53383 1.3E-83 12 386 IPR015424 Pyridoxal phosphate-dependent transferase Pfam PF00155 5.0E-51 30 380 IPR004839 Aminotransferase, class I/classII ProSitePatterns PS00105 NA 230 243 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site