Basic information   
Locus name LOC_Os02g27950
OrganismRice (Oryza sativa)
Taxonomic identifier[NCBI]
Function categoryOthers:Protein biosynthesis
Effect for SenescenceUnclear
Gene DescriptionAtaxin-2 N-terminal region family protein, expressed
EvidenceMolecular evidence: SSH, Northern blot and RT-PCR [Ref 1]
References
1: Liu L, Zhou Y, Zhou G, Ye R, Zhao L, Li X, Lin Y
Identification of early senescence-associated genes in rice flag leaves.
Plant Mol. Biol. 2008 May;67(1-2):37-55

SequenceLOC_Os02g27950.1 | Genomic | mRNA | CDS | Protein
miRNA Interaction      
Details
target: LOC_Os02g27950 
miRNA: osa-miR426
miRNA: osa-miR426
mfe: -22.1 kcal/mol 
p-value: 0.136239 

position:  790 
target 5' G    A        G      G 3' 
           GUGG GAUGAGCU CCAAAA  
           CAUU CUGUUUGA GGUUUU  
miRNA  3' G    C        A        5' 
Cross Link      
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR128547.9E-1442510No hitNA
PfamPF144388.6E-2661182IPR025852SM domain found in ataxin-2
PfamPF067414.3E-28216287IPR009604LsmAD domain