Basic information
Locus name	AT2G38860
Alias	YLS5
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Protein degradation/modification
Effect for Senescence	unclear
Gene Description	Encodes protease I (pfpI)-like protein YLS5
Evidence	Molecular evidence:DDRT-PCR [Ref 1]
References	1: Yoshida S, Ito M, Nishida I, Watanabe A Isolation and RNA gel blot analysis of genes that could serve as potential molecular markers for leaf senescence in Arabidopsis thaliana. Plant Cell Physiol. 2001 Feb;42(2):170-8
Sequence	AT2G38860.1 | Genomic | mRNA | CDS | Protein AT2G38860.2 | Genomic | mRNA | CDS | Protein AT2G38860.3 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: AT2G38860.1  miRNA: ath-miR414 miRNA: ath-miR414 mfe: -31.7 kcal/mol  p-value: 0.000232  position:  1046  target 5' A   A                 C 3'             UGA GGUGAUGGUGAAGGUGG              ACU CUACUACUACUUCUACU   miRNA  3'     G                   5'  target: AT2G38860.2  miRNA: ath-miR414 miRNA: ath-miR414 mfe: -31.7 kcal/mol  p-value: 0.000239  position:  1072  target 5' A   A                 C 3'             UGA GGUGAUGGUGAAGGUGG              ACU CUACUACUACUUCUACU   miRNA  3'     G                   5'
Ortholog Group
Ortholog Groups: OG5_170207	Accession Taxon NP_001118473 Arabidopsis thaliana NP_030434 Arabidopsis thaliana NP_191023 Arabidopsis thaliana NP_850303 ( AT2G38860 ) Arabidopsis thaliana NP_001068186 Oryza sativa Japonica Group
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR11019 6.7E-43 6 202 No hit NA SUPERFAMILY SSF52317 1.1E-35 6 198 No hit NA Pfam PF01965 1.4E-30 36 199 IPR002818 ThiJ/PfpI