Basic information
Locus name	LOC_Os08g23710
Organism	Rice (Oryza sativa)
Taxonomic identifier	[NCBI]
Function category	Others:Protein biosynthesis
Effect for Senescence	Unclear
Gene Description	60S ribosomal protein L7a, putative, expressed
Evidence	Molecular evidence: SSH, Northern blot and RT-PCR [Ref 1]
References	1: Liu L, Zhou Y, Zhou G, Ye R, Zhao L, Li X, Lin Y Identification of early senescence-associated genes in rice flag leaves. Plant Mol. Biol. 2008 May;67(1-2):37-55
Gene Ontology	biological process ribosome biogenesis cellular component ribonucleoprotein complex
Pathway	Reactome REACT_71
Sequence	LOC_Os08g23710.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_126938	Accession Taxon NP_182283 Arabidopsis thaliana NP_191846 Arabidopsis thaliana CML317C Cyanidioschyzon merolae strain 10D 195599 Chlamydomonas reinhardtii NP_113296 Guillardia theta ACO61085 Micromonas sp. RCC299 NP_001061550 ( LOC_Os08g23710 ) Oryza sativa Japonica Group NP_001063618 Oryza sativa Japonica Group fgenesh1_pg.C_Chr_02.0001000156 Ostreococcus tauri e_gw1.211.42.1 Physcomitrella patens subsp. patens estExt_fgenesh1_pm.C_370037 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_1490018 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_1490024 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_370214 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_900012 Physcomitrella patens subsp. patens 29726.m003934 Ricinus communis 29790.m000820 Ricinus communis 29790.m000835 Ricinus communis estExt_thaps1_ua_kg.C_chr_180065 Thalassiosira pseudonana CCMP1335 XP_002953425 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR23105 4.4E-117 4 257 No hit NA PRINTS PR00882 1.9E-69 29 46 IPR001921 Ribosomal protein L7A/L8 PRINTS PR00882 1.9E-69 46 63 IPR001921 Ribosomal protein L7A/L8 PRINTS PR00882 1.9E-69 66 85 IPR001921 Ribosomal protein L7A/L8 SUPERFAMILY SSF55315 1.5E-33 88 229 No hit NA PRINTS PR00882 1.9E-69 90 103 IPR001921 Ribosomal protein L7A/L8 Coils Coil NA 101 122 No hit NA Pfam PF01248 3.1E-25 115 204 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 PRINTS PR00882 1.9E-69 124 144 IPR001921 Ribosomal protein L7A/L8 PRINTS PR00881 2.1E-23 128 142 IPR018492 Ribosomal protein L7Ae/L8/Nhp2 family PRINTS PR00881 2.1E-23 147 160 IPR018492 Ribosomal protein L7Ae/L8/Nhp2 family PRINTS PR00881 2.1E-23 163 173 IPR018492 Ribosomal protein L7Ae/L8/Nhp2 family ProSitePatterns PS01082 NA 166 183 IPR004037 Ribosomal protein L7Ae conserved site PRINTS PR00881 2.1E-23 173 187 IPR018492 Ribosomal protein L7Ae/L8/Nhp2 family PRINTS PR00882 1.9E-69 185 209 IPR001921 Ribosomal protein L7A/L8 PRINTS PR00882 1.9E-69 217 237 IPR001921 Ribosomal protein L7A/L8