Basic information
Locus name	LOC_Os10g36848
Organism	Rice (Oryza sativa)
Taxonomic identifier	[NCBI]
Function category	Redox regulation:P450
Effect for Senescence	Unclear
Gene Description	Cytochrome P450 84A1, putative, expressed
Evidence	Molecular evidence: SSH, Northern blot and RT-PCR [Ref 1]
References	1: Liu L, Zhou Y, Zhou G, Ye R, Zhao L, Li X, Lin Y Identification of early senescence-associated genes in rice flag leaves. Plant Mol. Biol. 2008 May;67(1-2):37-55
Gene Ontology	biological process oxidation-reduction process molecular function electron carrier activity heme binding iron ion binding oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
Pathway	Reactome REACT_13433
Sequence	LOC_Os10g36848.1 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: LOC_Os10g36848  miRNA: osa-miR1848 miRNA: osa-miR1848 mfe: -33.8 kcal/mol  p-value: 0.027687  position:  340  target 5' G  C     A         A   A 3'             GC UG GC GCGCUGGCG AGG              CG GC CG CGCGGCCGC UCC   miRNA  3' A  U  G                  5'  target: LOC_Os10g36848  miRNA: osa-miR1848 miRNA: osa-miR1848 mfe: -35.6 kcal/mol  p-value: 0.014974  position:  635  target 5' C  U               C  C 3'             GC CGUGCGCGCC GUGG GG              CG GCGCGCGCGG CGCU CC   miRNA  3' A  U          C         5'  target: LOC_Os10g36848  miRNA: osa-miR1848 miRNA: osa-miR1848 mfe: -38.1 kcal/mol  p-value: 0.006347  position:  1032  target 5' C     C             C  G 3'             GC CG CG GCGCCGGCGA GG              CG GC GC CGCGGCCGCU CC   miRNA  3' A  U     G               5'  target: LOC_Os10g36848  miRNA: osa-miR1850 miRNA: osa-miR1850 mfe: -29.8 kcal/mol  p-value: 0.012937  position:  8  target 5' C   G    A            C 3'             CCU GAUC UCCUAACUUUCU              GGG UUAG AGGGUUGAAAGG   miRNA  3'     G                 U 5'  target: LOC_Os10g36848  miRNA: osa-miR2104 miRNA: osa-miR2104 mfe: -40.6 kcal/mol  p-value: 0.003509  position:  977  target 5' A                     A 3'             CAUGCUCGCGUUCCU CGCCG              GUGCGAGCGUAGGGG GCGGC   miRNA  3'                 A     G 5'  target: LOC_Os10g36848  miRNA: osa-miR2275a miRNA: osa-miR2275a mfe: -24.5 kcal/mol  p-value: 0.075332  position:  1116  target 5' C U      C        G   A 3'             G GAUGUU GGGGGGAC GAG              C CUAUAA CUCCUUUG UUU   miRNA  3' A U      C        G     5'  target: LOC_Os10g36848  miRNA: osa-miR2275b miRNA: osa-miR2275b mfe: -24.5 kcal/mol  p-value: 0.065136  position:  1116  target 5' C U      C        G   A 3'             G GAUGUU GGGGGGAC GAG              C CUAUAA CUCCUUUG UUU   miRNA  3' A U      C        G     5'  target: LOC_Os10g36848  miRNA: osa-miR395f miRNA: osa-miR395f mfe: -25.2 kcal/mol  p-value: 0.080705  position:  783  target 5' G              U     G 3'             GAGUU CUCCAAGC GUUCG              CUCAA GGGGUUUG UAAGU   miRNA  3'       G        U     G 5'
Ortholog Group
Ortholog Groups: OG5_164595	Accession Taxon NP_195345 Arabidopsis thaliana NP_196053 Arabidopsis thaliana NP_001048732 Oryza sativa Japonica Group NP_001065043 ( LOC_Os10g36848 ) Oryza sativa Japonica Group 30131.m007121 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR24298 4.9E-97 1 530 No hit NA Pfam PF00067 7.8E-88 40 511 IPR001128 Cytochrome P450 SUPERFAMILY SSF48264 1.3E-114 40 524 IPR001128 Cytochrome P450 PRINTS PR00463 1.7E-32 67 86 IPR002401 Cytochrome P450, E-class, group I PRINTS PR00463 1.7E-32 91 112 IPR002401 Cytochrome P450, E-class, group I PRINTS PR00463 1.7E-32 179 197 IPR002401 Cytochrome P450, E-class, group I PRINTS PR00463 1.7E-32 313 330 IPR002401 Cytochrome P450, E-class, group I PRINTS PR00385 2.4E-11 324 341 IPR001128 Cytochrome P450 PRINTS PR00463 1.7E-32 333 359 IPR002401 Cytochrome P450, E-class, group I PRINTS PR00463 1.7E-32 376 394 IPR002401 Cytochrome P450, E-class, group I PRINTS PR00385 2.4E-11 377 388 IPR001128 Cytochrome P450 PRINTS PR00463 1.7E-32 457 467 IPR002401 Cytochrome P450, E-class, group I PRINTS PR00385 2.4E-11 458 467 IPR001128 Cytochrome P450 ProSitePatterns PS00086 NA 460 469 IPR017972 Cytochrome P450, conserved site PRINTS PR00385 2.4E-11 467 478 IPR001128 Cytochrome P450 PRINTS PR00463 1.7E-32 467 490 IPR002401 Cytochrome P450, E-class, group I