Basic information
Locus name	LOC_Os01g01340
Organism	Rice (Oryza sativa)
Taxonomic identifier	[NCBI]
Function category	Regulation:Regulatory genes
Effect for Senescence	Unclear
Gene Description	Cytokinin-repressed protein CR9, putative, expressed
Evidence	Molecular evidence: SSH, Northern blot and RT-PCR [Ref 1]
References	1: Liu L, Zhou Y, Zhou G, Ye R, Zhao L, Li X, Lin Y Identification of early senescence-associated genes in rice flag leaves. Plant Mol. Biol. 2008 May;67(1-2):37-55
Sequence	LOC_Os01g01340.1 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: LOC_Os01g01340  miRNA: osa-miR1433 miRNA: osa-miR1433 mfe: -30.0 kcal/mol  p-value: 0.018602  position:  254  target 5' C      A U          G A 3'             GGUGGC G GGAGGCU GC G              CCAUCG C CCUCUGA CG U   miRNA  3'        G U       A  G   5'  target: LOC_Os01g01340  miRNA: osa-miR413 miRNA: osa-miR413 mfe: -25.2 kcal/mol  p-value: 0.017076  position:  924  target 5' U   U U U               A 3'             GUG C A GACAGGUGGGACUAG              CAC G U UUGUUCACUUUGAUC   miRNA  3'         C                 5'
Ortholog Group
Ortholog Groups: OG5_177843	Accession Taxon NP_189308 Arabidopsis thaliana NP_001041753 ( LOC_Os01g01340 ) Oryza sativa Japonica Group 30128.m008548 Ricinus communis 30131.m006987 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description Pfam PF07207 1.5E-55 1 127 IPR009856 Light regulated Lir1