Basic information
Locus name	LOC_Os05g02780
Organism	Rice (Oryza sativa)
Taxonomic identifier	[NCBI]
Function category	Others:Regulatory genes
Effect for Senescence	Unclear
Gene Description	XYPPX repeat family protein, expressed
Evidence	Molecular evidence: SSH/Northern blot/RT-PCR [Ref 1]
References	1: Liu L, Zhou Y, Zhou G, Ye R, Zhao L, Li X, Lin Y Identification of early senescence-associated genes in rice flag leaves. Plant Mol. Biol. 2008 May;67(1-2):37-55
Sequence	LOC_Os05g02780.1 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: LOC_Os05g02780  miRNA: osa-miR156k miRNA: osa-miR156k mfe: -28.2 kcal/mol  p-value: 0.003590  position:  1061  target 5' U  C   U              G A 3'             UG UGC UUUCUUUCUUCUGU A              AC ACG AGAGAGAGAAGACA U   miRNA  3'                       G   5'  target: LOC_Os05g02780  miRNA: osa-miR390 miRNA: osa-miR390 mfe: -29.7 kcal/mol  p-value: 0.021251  position:  455  target 5' U   G             C  G  A 3'             GGU GCUA CCCUCCUG GG CU              CCG CGAU GGGAGGAC UC GA   miRNA  3'          A              A 5'
Ortholog Group
Ortholog Groups: OG5_190421	Accession Taxon NP_193655 Arabidopsis thaliana NP_001054483 ( LOC_Os05g02780 ) Oryza sativa Japonica Group
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR31248 5.8E-51 1 197 No hit NA