Basic information
Locus name	LOC_Os03g24380
Organism	Rice (Oryza sativa)
Taxonomic identifier	[NCBI]
Function category	Redox regulation:peroxidase
Effect for Senescence	Unclear
Gene Description	Glutathione peroxidase, putative, expressed
Evidence	Molecular evidence: SSH/Northern blot/RT-PCR [Ref 1]
References	1: Liu L, Zhou Y, Zhou G, Ye R, Zhao L, Li X, Lin Y Identification of early senescence-associated genes in rice flag leaves. Plant Mol. Biol. 2008 May;67(1-2):37-55
Gene Ontology	biological process oxidation-reduction process response to oxidative stress molecular function glutathione peroxidase activity
Sequence	LOC_Os03g24380.1 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: LOC_Os03g24380  miRNA: osa-miR2864 miRNA: osa-miR2864 mfe: -35.0 kcal/mol  p-value: 0.001356  position:  91  target 5' G                    U 3'             GCGAGAUGGGGGCGGCGGAA              CGUUUUGUUCCCGUCGUUUU   miRNA  3' A                      5'  target: LOC_Os03g24380  miRNA: osa-miR529a miRNA: osa-miR529a mfe: -26.2 kcal/mol  p-value: 0.016545  position:  9  target 5' C            A      G 3'             GAGGAGAGAGAG G AUAG              UUCUUCUCUCUC C UGUC   miRNA  3' C            C A      5'
Ortholog Group
Ortholog Groups: OG5_126711	Accession Taxon NP_180080 Arabidopsis thaliana NP_180715 Arabidopsis thaliana NP_181863 Arabidopsis thaliana NP_191867 Arabidopsis thaliana NP_192897 Arabidopsis thaliana NP_194915 Arabidopsis thaliana NP_564813 Arabidopsis thaliana NP_566128 Arabidopsis thaliana 137012 Chlamydomonas reinhardtii 143122 Chlamydomonas reinhardtii 188373 Chlamydomonas reinhardtii 206090 Chlamydomonas reinhardtii ACO61270 Micromonas sp. RCC299 ACO61735 Micromonas sp. RCC299 ACO64598 Micromonas sp. RCC299 ACO67382 Micromonas sp. RCC299 NP_001047659 Oryza sativa Japonica Group NP_001050145 ( LOC_Os03g24380 ) Oryza sativa Japonica Group NP_001053524 Oryza sativa Japonica Group NP_001057006 Oryza sativa Japonica Group NP_001067699 Oryza sativa Japonica Group e_gw1.05.00.469.1 Ostreococcus tauri gw1.08.00.348.1 Ostreococcus tauri e_gw1.115.51.1 Physcomitrella patens subsp. patens e_gw1.297.39.1 Physcomitrella patens subsp. patens e_gw1.313.59.1 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_980004 Physcomitrella patens subsp. patens 29657.m000470 Ricinus communis 29848.m004526 Ricinus communis 30190.m011204 Ricinus communis 30190.m011205 Ricinus communis e_gw1.7.452.1 Thalassiosira pseudonana CCMP1335 thaps1_ua_kg.chr_20000029 Thalassiosira pseudonana CCMP1335 XP_002946406 Volvox carteri f. nagariensis XP_002947348 Volvox carteri f. nagariensis XP_002947451 Volvox carteri f. nagariensis XP_002950450 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PIRSF PIRSF000303 3.7E-73 1 169 IPR000889 Glutathione peroxidase ProSiteProfiles PS51355 70.5 2 169 IPR000889 Glutathione peroxidase PANTHER PTHR11592 2.5E-89 11 169 IPR000889 Glutathione peroxidase SUPERFAMILY SSF52833 6.6E-59 11 168 IPR012336 Thioredoxin-like fold Pfam PF00255 4.7E-43 12 120 IPR000889 Glutathione peroxidase PRINTS PR01011 9.8E-21 30 47 IPR000889 Glutathione peroxidase ProSitePatterns PS00460 NA 32 47 IPR000889 Glutathione peroxidase PRINTS PR01011 9.8E-21 66 82 IPR000889 Glutathione peroxidase ProSitePatterns PS00763 NA 69 76 IPR000889 Glutathione peroxidase PRINTS PR01011 9.8E-21 131 140 IPR000889 Glutathione peroxidase