Basic information
Locus name	LOC_Os06g51150
Organism	Rice (Oryza sativa)
Taxonomic identifier	[NCBI]
Function category	Redox regulation:Catalase
Effect for Senescence	Unclear
Gene Description	Catalase isozyme B, putative, expressed
Evidence	Molecular evidence: SSH/Northern blot/RT-PCR [Ref 1]
References	1: Liu L, Zhou Y, Zhou G, Ye R, Zhao L, Li X, Lin Y Identification of early senescence-associated genes in rice flag leaves. Plant Mol. Biol. 2008 May;67(1-2):37-55
Gene Ontology	biological process oxidation-reduction process response to oxidative stress molecular function catalase activity heme binding
Pathway	KEGG map00380 (EC 1.11.1.6) map00680 (EC 1.11.1.6) MetaCyc PWY-5506
Sequence	LOC_Os06g51150.1 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: LOC_Os06g51150  miRNA: osa-miR1867 miRNA: osa-miR1867 mfe: -29.3 kcal/mol  p-value: 0.008834  position:  1828  target 5' C   G  G                U 3'             CUU CU UGUCUUGGGAAAGAGA              GAG GA ACAGGAUCUUUUUUUU   miRNA  3' U   G  G                  5'
Ortholog Group
Ortholog Groups: OG5_127182	Accession Taxon NP_001031072 Arabidopsis thaliana NP_001031073 Arabidopsis thaliana NP_001031791 Arabidopsis thaliana NP_195235 Arabidopsis thaliana NP_564120 Arabidopsis thaliana NP_564121 Arabidopsis thaliana NP_973873 Arabidopsis thaliana CMI050C Cyanidioschyzon merolae strain 10D 150104 Chlamydomonas reinhardtii NP_001045673 Oryza sativa Japonica Group NP_001048861 Oryza sativa Japonica Group NP_001058635 ( LOC_Os06g51150 ) Oryza sativa Japonica Group e_gw1.3.315.1 Physcomitrella patens subsp. patens estExt_Genewise1.C_2590045 Physcomitrella patens subsp. patens estExt_Genewise1.C_4220004 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_2920023 Physcomitrella patens subsp. patens fgenesh1_pg.scaffold_223000044 Physcomitrella patens subsp. patens fgenesh1_pg.scaffold_3000179 Physcomitrella patens subsp. patens gw1.4424.3.1 Physcomitrella patens subsp. patens 29830.m001438 Ricinus communis 30170.m014364 Ricinus communis XP_002950455 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PIRSF PIRSF038928 5.7E-199 2 491 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 PANTHER PTHR11465 9.5E-289 7 489 IPR018028 Catalase, mono-functional, haem-containing SUPERFAMILY SSF56634 4.1E-209 10 489 IPR020835 Catalase-like domain ProSiteProfiles PS51402 74.2 14 492 IPR018028 Catalase, mono-functional, haem-containing Pfam PF00199 3.8E-180 18 400 IPR011614 Catalase core domain SMART SM01060 6.7E-249 18 401 IPR011614 Catalase core domain PRINTS PR00067 7.4E-81 31 54 IPR018028 Catalase, mono-functional, haem-containing ProSitePatterns PS00438 NA 54 70 IPR024708 Catalase active site PRINTS PR00067 7.4E-81 94 112 IPR018028 Catalase, mono-functional, haem-containing PRINTS PR00067 7.4E-81 115 132 IPR018028 Catalase, mono-functional, haem-containing PRINTS PR00067 7.4E-81 134 152 IPR018028 Catalase, mono-functional, haem-containing PRINTS PR00067 7.4E-81 299 326 IPR018028 Catalase, mono-functional, haem-containing PRINTS PR00067 7.4E-81 331 357 IPR018028 Catalase, mono-functional, haem-containing ProSitePatterns PS00437 NA 344 352 IPR002226 Catalase haem-binding site Pfam PF06628 1.6E-19 420 487 IPR010582 Catalase immune-responsive domain