Basic information
Locus name	LOC_Os07g49400
Organism	Rice (Oryza sativa)
Taxonomic identifier	[NCBI]
Function category	Others:Detoxification
Effect for Senescence	Unclear
Gene Description	l-ascorbate peroxidase 2, cytosolic, putative, expressed
Evidence	Molecular evidence: SSH/Northern blot/RT-PCR [Ref 1]
References	1: Liu L, Zhou Y, Zhou G, Ye R, Zhao L, Li X, Lin Y Identification of early senescence-associated genes in rice flag leaves. Plant Mol. Biol. 2008 May;67(1-2):37-55
Gene Ontology	biological process oxidation-reduction process response to oxidative stress molecular function heme binding peroxidase activity
Pathway	KEGG map00360 (EC 1.11.1.7) map00680 (EC 1.11.1.7) map00940 (EC 1.11.1.7) MetaCyc PWY-5461
Sequence	LOC_Os07g49400.1 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: LOC_Os07g49400  miRNA: osa-miR160f miRNA: osa-miR160f mfe: -34.2 kcal/mol  p-value: 0.004440  position:  646  target 5' C    U  G        U  A  U 3'             UGGC UU AGGGAGCC GG CG              ACCG AA UCCCUCGG CC GU   miRNA  3'      U  G        U       5'  target: LOC_Os07g49400  miRNA: osa-miR1860-3p miRNA: osa-miR1860-3p mfe: -28.3 kcal/mol  p-value: 0.005600  position:  637  target 5' A                 G   G 3'             GGAG AGAUCUGGCUUU AGG              UCUC UUUGGAUCGAAG UCU   miRNA  3'      U            G   A 5'  target: LOC_Os07g49400  miRNA: osa-miR444a miRNA: osa-miR444a mfe: -27.7 kcal/mol  p-value: 0.032097  position:  121  target 5' G    A           G C   C 3'             GAGC UG GGCAGCAA U GUA              UUCG AC CCGUCGUU A CGU   miRNA  3'      A  U        G       5'  target: LOC_Os07g49400  miRNA: osa-miR444d miRNA: osa-miR444d mfe: -27.7 kcal/mol  p-value: 0.039506  position:  121  target 5' G    A           G C   C 3'             GAGC UG GGCAGCAA U GUA              UUCG AC CCGUCGUU A CGU   miRNA  3'      A  U        G       5'  target: LOC_Os07g49400  miRNA: osa-miR444e miRNA: osa-miR444e mfe: -27.7 kcal/mol  p-value: 0.039099  position:  121  target 5' G    A           G C   C 3'             GAGC UG GGCAGCAA U GUA              UUCG AC CCGUCGUU A CGU   miRNA  3'      A  U        G       5'
Ortholog Group
Ortholog Groups: OG5_142967	Accession Taxon NP_001030991 Arabidopsis thaliana NP_001030992 Arabidopsis thaliana NP_001077481 Arabidopsis thaliana NP_001077482 Arabidopsis thaliana NP_001117244 Arabidopsis thaliana NP_172267 Arabidopsis thaliana NP_849607 Arabidopsis thaliana NP_973786 Arabidopsis thaliana NP_001049769 Oryza sativa Japonica Group NP_001060741 ( LOC_Os07g49400 ) Oryza sativa Japonica Group e_gw1.152.110.1 Physcomitrella patens subsp. patens fgenesh1_kg.scaffold_152000004 Physcomitrella patens subsp. patens e_gw1.22.138.1 Thalassiosira pseudonana CCMP1335
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR31356 5.7E-132 1 251 No hit NA SUPERFAMILY SSF48113 1.3E-78 6 247 IPR010255 Haem peroxidase PRINTS PR00459 6.9E-119 13 33 IPR002207 Plant ascorbate peroxidase Pfam PF00141 1.2E-46 27 228 IPR002016 Haem peroxidase, plant/fungal/bacterial PRINTS PR00458 2.5E-27 34 48 IPR002016 Haem peroxidase, plant/fungal/bacterial PRINTS PR00459 6.9E-119 34 49 IPR002207 Plant ascorbate peroxidase ProSitePatterns PS00436 NA 34 45 IPR019794 Peroxidase, active site PRINTS PR00459 6.9E-119 52 62 IPR002207 Plant ascorbate peroxidase PRINTS PR00459 6.9E-119 66 90 IPR002207 Plant ascorbate peroxidase PRINTS PR00459 6.9E-119 91 109 IPR002207 Plant ascorbate peroxidase ProSiteProfiles PS50873 15.4 91 251 IPR002016 Haem peroxidase, plant/fungal/bacterial PRINTS PR00458 2.5E-27 92 109 IPR002016 Haem peroxidase, plant/fungal/bacterial PRINTS PR00458 2.5E-27 110 122 IPR002016 Haem peroxidase, plant/fungal/bacterial PRINTS PR00459 6.9E-119 110 122 IPR002207 Plant ascorbate peroxidase PRINTS PR00459 6.9E-119 131 148 IPR002207 Plant ascorbate peroxidase PRINTS PR00459 6.9E-119 150 171 IPR002207 Plant ascorbate peroxidase PRINTS PR00458 2.5E-27 156 171 IPR002016 Haem peroxidase, plant/fungal/bacterial ProSitePatterns PS00435 NA 156 166 IPR019793 Peroxidases heam-ligand binding site PRINTS PR00459 6.9E-119 172 196 IPR002207 Plant ascorbate peroxidase PRINTS PR00458 2.5E-27 180 195 IPR002016 Haem peroxidase, plant/fungal/bacterial PRINTS PR00459 6.9E-119 224 248 IPR002207 Plant ascorbate peroxidase