Basic information
Locus name	LOC_Os02g57280
Organism	Rice (Oryza sativa)
Taxonomic identifier	[NCBI]
Function category	Others:Stress
Effect for Senescence	Unclear
Gene Description	CBS domain containing protein, expressed
Evidence	Molecular evidence: SSH/Northern blot/RT-PCR [Ref 1]
References	1: Liu L, Zhou Y, Zhou G, Ye R, Zhao L, Li X, Lin Y Identification of early senescence-associated genes in rice flag leaves. Plant Mol. Biol. 2008 May;67(1-2):37-55
Gene Ontology	molecular function protein binding
Sequence	LOC_Os02g57280.1 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: LOC_Os02g57280  miRNA: osa-miR1846e miRNA: osa-miR1846e mfe: -29.4 kcal/mol  p-value: 0.042692  position:  414  target 5' C      A         A   A 3'             GGUCUC GGUCUCC C GUU              CCAGGG CCGGAGG G CAA   miRNA  3' A              A     C 5'
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR11911 1.7E-49 40 211 No hit NA SUPERFAMILY SSF54631 1.1E-24 92 206 No hit NA ProSiteProfiles PS51371 6.1 97 152 IPR000644 Cystathionine beta-synthase, core SMART SM00116 2.0 100 146 IPR000644 Cystathionine beta-synthase, core Pfam PF00571 1.7E-16 153 207 IPR000644 Cystathionine beta-synthase, core ProSiteProfiles PS51371 14.7 156 212 IPR000644 Cystathionine beta-synthase, core SMART SM00116 2.8E-11 159 207 IPR000644 Cystathionine beta-synthase, core