Basic information
Locus name	LOC_Os10g41930
Organism	Rice (Oryza sativa)
Taxonomic identifier	[NCBI]
Function category	Others:stress
Effect for Senescence	Unclear
Gene Description	Haloacid dehalogenase-like hydrolase family protein, putative, expressed
Evidence	Molecular evidence: SSH/Northern blot/RT-PCR [Ref 1]
References	1: Liu L, Zhou Y, Zhou G, Ye R, Zhao L, Li X, Lin Y Identification of early senescence-associated genes in rice flag leaves. Plant Mol. Biol. 2008 May;67(1-2):37-55
Gene Ontology	molecular function hydrolase activity
Sequence	LOC_Os10g41930.1 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: LOC_Os10g41930  miRNA: osa-miR1429-3p miRNA: osa-miR1429-3p mfe: -24.4 kcal/mol  p-value: 0.108650  position:  609  target 5' A   C    U           A 3'             GGC UGCA GAUCUGUGCAG              UUG AUGU UUGGGCACGUU   miRNA  3' G   U                G 5'
Cross Link
Database Entry ID E-value Start End InterPro ID Description SUPERFAMILY SSF56784 2.4E-48 52 278 IPR023214 HAD-like domain PANTHER PTHR18901 2.4E-51 57 272 No hit NA Pfam PF13419 9.7E-23 62 243 IPR023214 HAD-like domain TIGRFAM TIGR01509 4.9E-10 132 244 IPR006402 HAD-superfamily hydrolase, subfamily IA, variant 3