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| Locus name | LOC_Os07g37250 |
| Alias | NYC4 |
| Organism | Rice (Oryza sativa) |
| Taxonomic identifier | [NCBI] |
| Function category | Chlorophyll degradation |
| Effect for Senescence | promote |
| Gene Description | NYC4, the rice ortholog of Arabidopsis THF1, is involved in the degradation of chlorophyll-protein complexes during leaf senescence.nyc4-1, a stay-green mutant with a defect in chlorophyll breakdown during leaf senescence |
| Evidence | Genetic evidence:Mutant [Ref 1] |
| References | 1: Yamatani H, Sato Y, Masuda Y, Kato Y, Morita R, Fukunaga K, Nagamura Y, Nishimura M, Sakamoto W, Tanaka A, Kusaba M.NYC4, the rice ortholog of Arabidopsis THF1, is involved in the degradation of chlorophyll - protein complexes during leaf senescencePlant J. 2013 May;74(4):652-62. doi: 10.1111/tpj.12154. Epub 2013 Apr 8. |
| Gene Ontology | |
| Sequence | LOC_Os07g37250.1 | Genomic | mRNA | CDS | Protein
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| Mutant name |
nyc4-1 |
| Mutant/Transgenic |
mutant |
| Ecotype |
rice |
| Mutagenesis type |
EMS |
miRNA Interaction  | |
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| Details | | target: LOC_Os07g37250.1
miRNA: osa-miR5075
miRNA: osa-miR5075
mfe: -44.8 kcal/mol
p-value: 0.000036
position: 203
target 5' G C 3'
GCGG CGGCGGCGGCGGGGG
CGCC GCCGCCGCUGCCUCU
miRNA 3' U U 5'
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| Ortholog Group | |
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| Ortholog Groups: OG5_145015 | |
| Cross Link | |
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