Basic information
Locus name	GSMUA_Achr2G14330_001
Organism	Banana (Musa acuminata)
Taxonomic identifier	[NCBI]
Function category	Cell wall metabolism
Effect for Senescence	Unclear
Gene Description	Putative Polygalacturonase At1g48100
Evidence	Molecular evidence:RNA sequencing [Ref 1]
References	1: D'Hont A, Denoeud F, Aury JM, Baurens FC, Carreel F, Garsmeur O, Noel B, Bocs S, Droc G, Rouard M, Da Silva C, Jabbari K, Cardi C, Poulain J, Souquet M, Labadie K, Jourda C, Lengelle J, Rodier-Goud M, Alberti A, Bernard M, Correa M, Ayyampalayam S, Mckain The banana (Musa acuminata) genome and the evolution of monocotyledonous plants. Nature 2012 Aug 9;488(7410):213-7
Gene Ontology	biological process carbohydrate metabolic process molecular function polygalacturonase activity
Sequence	GSMUA_Achr2T14330_001 | Genomic | mRNA | CDS | Protein
Cross Link
Database Entry ID E-value Start End InterPro ID Description ProSiteProfiles PS51257 6.0 1 21 No hit NA SUPERFAMILY SSF51126 3.6E-124 73 449 IPR011050 Pectin lyase fold/virulence factor PANTHER PTHR31375 3.0E-178 75 451 No hit NA Pfam PF00295 1.4E-93 105 418 IPR000743 Glycoside hydrolase, family 28 SMART SM00710 53.0 209 258 IPR006626 Parallel beta-helix repeat SMART SM00710 5,900.0 259 280 IPR006626 Parallel beta-helix repeat SMART SM00710 5,900.0 282 302 IPR006626 Parallel beta-helix repeat SMART SM00710 140.0 312 333 IPR006626 Parallel beta-helix repeat SMART SM00710 10,000.0 341 362 IPR006626 Parallel beta-helix repeat