|
|
|
|
| Locus name | LOC_Os12g37890 |
| Organism | Rice (Oryza sativa) | | Taxonomic identifier | [NCBI] | | Function category | Others:Unknown | | Effect for Senescence | Unclear | | Gene Description | Expressed protein | | Evidence | Molecular evidence:SSH [Ref 1] | | References | 1: Liu L, Zhou Y, Zhou G, Ye R, Zhao L, Li X, Lin YIdentification of early senescence-associated genes in rice flag leaves.Plant Mol. Biol. 2008 May;67(1-2):37-55 | | Sequence | LOC_Os12g37890.1 | Genomic | mRNA | CDS | Protein
|
miRNA Interaction  | |
| | Details | | target: LOC_Os12g37890 miRNA: osa-miR1429-3p miRNA: osa-miR1429-3p mfe: -24.4 kcal/mol p-value: 0.416445
position: 221 target 5' A C G 3' CGACG ACGAGCCU UGCGG GUUGU UGUUUGGG ACGUU miRNA 3' A C G 5'
target: LOC_Os12g37890 miRNA: osa-miR1852 miRNA: osa-miR1852 mfe: -29.1 kcal/mol p-value: 0.011393
position: 5534 target 5' G G 3' UUUGCA UCUGAAUCCAUA GGACGU AGACUUAGGUAU miRNA 3' U A A 5'
target: LOC_Os12g37890 miRNA: osa-miR2864 miRNA: osa-miR2864 mfe: -24.1 kcal/mol p-value: 0.412711
position: 5048 target 5' C A C U C 3' UGCGAGGC A GGGGCA CGAG ACGUUUUG U UCCCGU GUUU miRNA 3' C U 5'
target: LOC_Os12g37890 miRNA: osa-miR444a miRNA: osa-miR444a mfe: -27.4 kcal/mol p-value: 0.147114
position: 161 target 5' C C G G 3' GGC UG GGCGGCGGC GU UCG AC CCGUCGUUG CG miRNA 3' U A U A U 5'
target: LOC_Os12g37890 miRNA: osa-miR444d miRNA: osa-miR444d mfe: -27.4 kcal/mol p-value: 0.147536
position: 161 target 5' C C G G 3' GGC UG GGCGGCGGC GU UCG AC CCGUCGUUG CG miRNA 3' U A U A U 5'
target: LOC_Os12g37890 miRNA: osa-miR444e miRNA: osa-miR444e mfe: -27.4 kcal/mol p-value: 0.154603
position: 161 target 5' C C G G 3' GGC UG GGCGGCGGC GU UCG AC CCGUCGUUG CG miRNA 3' U A U A U 5'
|
|
Cross Link  | |
| |
|