Basic information
Locus name	GSMUA_Achr5G27120_001
Organism	Banana (Musa acuminata)
Taxonomic identifier	[NCBI]
Function category	Turnover DNA-RNA-protein
Effect for Senescence	Unclear
Gene Description	Calreticulin
Evidence	Molecular evidence:RNA sequencing [Ref 1]
References	1: D'Hont A, Denoeud F, Aury JM, Baurens FC, Carreel F, Garsmeur O, Noel B, Bocs S, Droc G, Rouard M, Da Silva C, Jabbari K, Cardi C, Poulain J, Souquet M, Labadie K, Jourda C, Lengelle J, Rodier-Goud M, Alberti A, Bernard M, Correa M, Ayyampalayam S, Mckain The banana (Musa acuminata) genome and the evolution of monocotyledonous plants. Nature 2012 Aug 9;488(7410):213-7
Gene Ontology	biological process protein folding cellular component endoplasmic reticulum molecular function calcium ion binding unfolded protein binding
Sequence	GSMUA_Achr5T27120_001 | Genomic | mRNA | CDS | Protein
Cross Link
Database Entry ID E-value Start End InterPro ID Description PIRSF PIRSF002356 4.2E-273 4 414 IPR009169 Calreticulin PANTHER PTHR11073 1.6E-241 9 413 IPR001580 Calreticulin/calnexin SUPERFAMILY SSF49899 1.9E-70 23 224 IPR008985 Concanavalin A-like lectin/glucanases superfamily Pfam PF00262 1.8E-117 27 339 IPR001580 Calreticulin/calnexin ProSitePatterns PS00803 NA 104 119 IPR018124 Calreticulin/calnexin, conserved site PRINTS PR00626 3.1E-56 106 124 IPR001580 Calreticulin/calnexin PRINTS PR00626 3.1E-56 132 148 IPR001580 Calreticulin/calnexin ProSitePatterns PS00804 NA 136 144 IPR018124 Calreticulin/calnexin, conserved site SUPERFAMILY SSF63887 1.1E-43 207 322 IPR009033 Calreticulin/calnexin, P domain ProSitePatterns PS00805 NA 214 226 IPR018124 Calreticulin/calnexin, conserved site PRINTS PR00626 3.1E-56 221 234 IPR001580 Calreticulin/calnexin PRINTS PR00626 3.1E-56 249 271 IPR001580 Calreticulin/calnexin ProSitePatterns PS00805 NA 249 261 IPR018124 Calreticulin/calnexin, conserved site PRINTS PR00626 3.1E-56 287 306 IPR001580 Calreticulin/calnexin PRINTS PR00626 3.1E-56 320 340 IPR001580 Calreticulin/calnexin Coils Coil NA 358 379 No hit NA