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| Locus name | AT4G02380 |
| Organism | Arabidopsis thaliana |
| Taxonomic identifier | [NCBI] |
| Function category | Others:defense |
| Effect for Senescence | unclear |
| Gene Description | Similar to small stress-induced proteins |
| Evidence | Molecular evidence:cDNA library [Ref 1] |
| References | 1: Y.GUO, Z.CAI, S.GAN.Transcriptome of Arabidopsis leaf senescence.Plant, Cell & Environment 2004, 27(5):521-549. |
| Gene Ontology | |
| Sequence | AT4G02380.1 | Genomic | mRNA | CDS | Protein
AT4G02380.2 | Genomic | mRNA | CDS | Protein
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miRNA Interaction  | |
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| Details | | target: AT4G02380.1
miRNA: ath-miR2936
miRNA: ath-miR2936
mfe: -32.3 kcal/mol
p-value: 0.000238
position: 150
target 5' A U U A 3'
GUCUGU UUCUCUCU UUCAAG
CAGACA AAGAGAGA GAGUUC
miRNA 3' G C 5'
target: AT4G02380.1
miRNA: ath-miR847
miRNA: ath-miR847
mfe: -27.3 kcal/mol
p-value: 0.004060
position: 340
target 5' G G A 3'
AU AAGAAGAAGG GAGUGG
UA UUCUUCUUCU CUCACU
miRNA 3' G G C 5'
target: AT4G02380.2
miRNA: ath-miR2936
miRNA: ath-miR2936
mfe: -32.3 kcal/mol
p-value: 0.000160
position: 146
target 5' A U U A 3'
GUCUGU UUCUCUCU UUCAAG
CAGACA AAGAGAGA GAGUUC
miRNA 3' G C 5'
target: AT4G02380.2
miRNA: ath-miR847
miRNA: ath-miR847
mfe: -27.3 kcal/mol
p-value: 0.002956
position: 340
target 5' G G A 3'
AU AAGAAGAAGG GAGUGG
UA UUCUUCUUCU CUCACU
miRNA 3' G G C 5'
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| Ortholog Group | |
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| Ortholog Groups: OG5_164305 | |
| Cross Link | |
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| Database | Entry ID | E-value | Start | End | InterPro ID | Description | | Pfam | PF03242 | 4.6E-38 | 1 | 94 | IPR004926 | Late embryogenesis abundant protein, LEA-5 |
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