Leaf Senescence DataBase

Basic information

Locus name

AT2G15390

Organism

Arabidopsis thaliana

Taxonomic identifier

[NCBI]

Function category

Others:Metabolism

Effect for Senescence

Unclear

Gene Description

Fucosyltransferase-like protein FUT4

Evidence

Genomic evidence:microarray data [Ref 1]

References

1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4):567-85

Gene Ontology

biological process	cell wall biogenesis
cellular component	membrane
molecular function	galactoside 2-alpha-L-fucosyltransferase activity

Pathway

KEGG

map00051 (EC 2.4.1.-)
map00510 (EC 2.4.1.-)
map00512 (EC 2.4.1.-)
map00513 (EC 2.4.1.-)
map00514 (EC 2.4.1.-)
map00522 (EC 2.4.1.-)
map00524 (EC 2.4.1.-)
map00533 (EC 2.4.1.-)
map00540 (EC 2.4.1.-)
map00550 (EC 2.4.1.-)
map00561 (EC 2.4.1.-)
map00563 (EC 2.4.1.-)
map00600 (EC 2.4.1.-)
map00601 (EC 2.4.1.-)
map00603 (EC 2.4.1.-)
map00604 (EC 2.4.1.-)
map00906 (EC 2.4.1.-)
map00908 (EC 2.4.1.-)
map00941 (EC 2.4.1.-)
map00942 (EC 2.4.1.-)
map00944 (EC 2.4.1.-)
map00945 (EC 2.4.1.-)
map00965 (EC 2.4.1.-)

Sequence

Microarray

Sampling

Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ.
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4)

Comparation

Legends:
Col: wild type, indicates the ratio of expression in senescing leaves/green leaves.
NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type.
Genes showing at least 3 fold (ratio) up regulation during leaf senescence.

Ortholog Group

Ortholog Groups: OG5_140440

Accession	Taxon
NP_001077531	Arabidopsis thaliana
NP_172859	Arabidopsis thaliana
NP_172860	Arabidopsis thaliana
NP_172863	Arabidopsis thaliana
NP_178420	Arabidopsis thaliana
NP_178421	Arabidopsis thaliana
NP_179137	Arabidopsis thaliana
NP_179139	Arabidopsis thaliana
NP_179141	Arabidopsis thaliana
NP_973468 ( AT2G15390 )	Arabidopsis thaliana
NP_001048215	Oryza sativa Japonica Group
e_gw1.352.43.1	Physcomitrella patens subsp. patens
gw1.126.26.1	Physcomitrella patens subsp. patens
29813.m001528	Ricinus communis
30138.m004050	Ricinus communis

Cross Link

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PANTHER	PTHR31889	3.9E-252	21	535	No hit	NA
Pfam	PF03254	7.8E-223	43	505	IPR004938	Xyloglucan fucosyltransferase

Subcellular Localization

Localization 1
	Localization	golgi
	Evidence	SUBAcon
	Pubmed ID	23180787

Localization 2
	Localization	plasma membrane,golgi
	Evidence	SUBAcon
	Pubmed ID	23180787