Basic information
Locus name	GSMUA_Achr9G27610_001
Organism	Banana (Musa acuminata)
Taxonomic identifier	[NCBI]
Function category	Cell wall metabolism
Effect for Senescence	Unclear
Gene Description	Putative Exopolygalacturonase (Fragment)
Evidence	Molecular evidence:RNA sequencing [Ref 1]
References	1: D'Hont A, Denoeud F, Aury JM, Baurens FC, Carreel F, Garsmeur O, Noel B, Bocs S, Droc G, Rouard M, Da Silva C, Jabbari K, Cardi C, Poulain J, Souquet M, Labadie K, Jourda C, Lengelle J, Rodier-Goud M, Alberti A, Bernard M, Correa M, Ayyampalayam S, Mckain The banana (Musa acuminata) genome and the evolution of monocotyledonous plants. Nature 2012 Aug 9;488(7410):213-7
Gene Ontology	biological process carbohydrate metabolic process molecular function polygalacturonase activity
Sequence	GSMUA_Achr9T27610_001 | Genomic | mRNA | CDS | Protein
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR31375 1.3E-169 21 373 No hit NA SUPERFAMILY SSF51126 1.8E-106 26 371 IPR011050 Pectin lyase fold/virulence factor Pfam PF00295 2.8E-102 56 370 IPR000743 Glycoside hydrolase, family 28 SMART SM00710 6,900.0 169 208 IPR006626 Parallel beta-helix repeat SMART SM00710 970.0 209 229 IPR006626 Parallel beta-helix repeat SMART SM00710 2,400.0 230 252 IPR006626 Parallel beta-helix repeat ProSitePatterns PS00502 NA 239 252 IPR000743 Glycoside hydrolase, family 28 SMART SM00710 1.3 262 283 IPR006626 Parallel beta-helix repeat SMART SM00710 4,700.0 293 314 IPR006626 Parallel beta-helix repeat