Basic information
Locus name	AT1G07380
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others:unclear
Effect for Senescence	unclear
Gene Description	Similar to alkaline ceramidase dbj|BAA88409.1
Evidence	Molecular evidence:cDNA library [Ref 1]; Genomic evidence: microarray data [Ref 2]
References	1: Y.GUO, Z.CAI, S.GAN. Transcriptome of Arabidopsis leaf senescence. Plant, Cell & Environment 2004, 27(5):521-549. 2: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Pathway	KEGG map00600 (EC 3.5.1.23) MetaCyc PWY-6483
Sequence	AT1G07380.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_129670	Accession Taxon NP_172218 ( AT1G07380 ) Arabidopsis thaliana NP_181337 Arabidopsis thaliana NP_200706 Arabidopsis thaliana NP_973628 Arabidopsis thaliana 120172 Chlamydomonas reinhardtii ACO63157 Micromonas sp. RCC299 NP_001043618 Oryza sativa Japonica Group fgenesh1_pg.scaffold_227000029 Physcomitrella patens subsp. patens fgenesh1_pm.scaffold_3000041 Physcomitrella patens subsp. patens 27798.m000593 Ricinus communis 29751.m001808 Ricinus communis 30170.m014322 Ricinus communis XP_002953224 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR12670 0.0 1 779 IPR006823 Neutral/alkaline nonlysosomal ceramidase Pfam PF04734 0.0 36 778 IPR006823 Neutral/alkaline nonlysosomal ceramidase
Subcellular Localization
Localization	vacuole,plasma membrane
Evidence	SUBAcon
Pubmed ID	23180787