Basic information
Locus name	GRMZM2G062396
Organism	Maize (Zea mays)
Taxonomic identifier	[NCBI]
Function category	secondary metabolism.flavonoids.dihydroflavonols
Effect for Senescence	unclear
Gene Description	Expression level was up-regulated at 18 DAA (Day After Anthesis)or later.
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Sekhon RS, Childs KL, Santoro N, Foster CE, Buell CR, de Leon N, Kaeppler SM Transcriptional and metabolic analysis of senescence induced by preventing pollination in maize. Plant Physiol. 2012 Aug;159(4):1730-44
Gene Ontology	biological process oxidation-reduction process molecular function metal ion binding oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
Pathway	KEGG map00591 (EC 1.13.11.12) map00592 (EC 1.13.11.12) MetaCyc PWY-5410
Sequence	GRMZM2G062396_T01 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: GRMZM2G062396_T01  miRNA: zma-miR408a miRNA: zma-miR408a mfe: -42.3 kcal/mol  p-value: 0.000094  position: 630  target 5' U                    G  3'             CCAGGG GGAGGCGGUGCAG                 GGUCCC UCUCCGUCACGUC      miRNA  3' C      U                5'  target: GRMZM2G062396_T01  miRNA: zma-miR408b-3p miRNA: zma-miR408b-3p mfe: -42.3 kcal/mol  p-value: 0.000095  position: 630  target 5' U                    G  3'             CCAGGG GGAGGCGGUGCAG                 GGUCCC UCUCCGUCACGUC      miRNA  3' C      U                5'
Cross Link
Database Entry ID E-value Start End InterPro ID Description SMART SM00308 1.5E-57 16 160 IPR001024 Lipoxygenase, LH2 SUPERFAMILY SSF49723 1.6E-52 16 163 IPR008976 Lipase/lipooxygenase, PLAT/LH2 PANTHER PTHR11771 0.0 30 864 IPR000907 Lipoxygenase ProSiteProfiles PS50095 21.3 39 159 IPR001024 Lipoxygenase, LH2 Pfam PF01477 2.4E-16 65 158 IPR001024 Lipoxygenase, LH2 PRINTS PR00468 4.4E-89 129 147 IPR001246 Lipoxygenase, plant PRINTS PR00468 4.4E-89 155 176 IPR001246 Lipoxygenase, plant ProSiteProfiles PS51393 320.8 162 864 IPR013819 Lipoxygenase, C-terminal SUPERFAMILY SSF48484 3.8E-277 164 864 IPR013819 Lipoxygenase, C-terminal Pfam PF00305 1.3E-293 169 841 IPR013819 Lipoxygenase, C-terminal PRINTS PR00468 4.4E-89 195 211 IPR001246 Lipoxygenase, plant PRINTS PR00468 4.4E-89 226 245 IPR001246 Lipoxygenase, plant PRINTS PR00468 4.4E-89 294 315 IPR001246 Lipoxygenase, plant PRINTS PR00468 4.4E-89 343 359 IPR001246 Lipoxygenase, plant PRINTS PR00468 4.4E-89 382 401 IPR001246 Lipoxygenase, plant PRINTS PR00468 4.4E-89 449 473 IPR001246 Lipoxygenase, plant PRINTS PR00087 8.0E-23 496 513 IPR013819 Lipoxygenase, C-terminal PRINTS PR00087 8.0E-23 514 531 IPR013819 Lipoxygenase, C-terminal ProSitePatterns PS00711 NA 514 528 IPR020833 Lipoxygenase, iron binding site PRINTS PR00087 8.0E-23 534 554 IPR013819 Lipoxygenase, C-terminal PRINTS PR00468 4.4E-89 771 785 IPR001246 Lipoxygenase, plant