Basic information
Locus name	GRMZM2G088396
Organism	Maize (Zea mays)
Taxonomic identifier	[NCBI]
Function category	secondary metabolism.isoprenoids.tocopherol biosynthesis.hydroxyphenylpyruvate dioxygenase
Effect for Senescence	unclear
Gene Description	Expression level was up-regulated at 18 DAA (Day After Anthesis)or later.
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Sekhon RS, Childs KL, Santoro N, Foster CE, Buell CR, de Leon N, Kaeppler SM Transcriptional and metabolic analysis of senescence induced by preventing pollination in maize. Plant Physiol. 2012 Aug;159(4):1730-44
Gene Ontology	biological process aromatic amino acid family metabolic process oxidation-reduction process molecular function 4-hydroxyphenylpyruvate dioxygenase activity oxidoreductase activity, acting on single donors with incorporation of molecular oxygen
Sequence	GRMZM2G088396_T01 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: GRMZM2G088396_T01  miRNA: zma-miR164h-5p miRNA: zma-miR164h-5p mfe: -36.5 kcal/mol  p-value: 0.000645  position: 373  target 5' G               G     C  3'             CACGCGU CCCUGCU CUCCG                 GUGUGCA GGGACGA GAGGU      miRNA  3'         C       A        5'
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR11959 1.8E-130 21 436 IPR005956 4-hydroxyphenylpyruvate dioxygenase PIRSF PIRSF009283 2.9E-118 36 434 IPR005956 4-hydroxyphenylpyruvate dioxygenase SUPERFAMILY SSF54593 6.5E-89 37 420 No hit NA TIGRFAM TIGR01263 9.4E-102 47 431 IPR005956 4-hydroxyphenylpyruvate dioxygenase Pfam PF00903 4.1E-9 216 372 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain