|
|
| Locus name | GRMZM2G106363 |
| Organism | Maize (Zea mays) |
| Taxonomic identifier | [NCBI] |
| Function category | protein.degradation.ubiquitin.E3.SCF.FBOX |
| Effect for Senescence | unclear |
| Gene Description | Expression level was up-regulated at 18 DAA (Day After Anthesis)or later. |
| Evidence | Genomic evidence:microarray data [Ref 1] |
| References | 1: Sekhon RS, Childs KL, Santoro N, Foster CE, Buell CR, de Leon N, Kaeppler SMTranscriptional and metabolic analysis of senescence induced by preventing pollination in maize.Plant Physiol. 2012 Aug;159(4):1730-44 |
| Sequence | GRMZM2G106363_T01 | Genomic | mRNA | CDS | Protein
GRMZM2G106363_T02 | Genomic | mRNA | CDS | Protein
|
miRNA Interaction  | |
|
| Details | | target: GRMZM2G106363_T01
miRNA: zma-miR2275a-3p
miRNA: zma-miR2275a-3p
mfe: -29.5 kcal/mol
p-value: 0.002804
position: 202
target 5' A C G G 3'
UGAGG UGU GGAGGAGGACGAG
ACUCU AUA CCUCCUUUUGUUU
miRNA 3' A 5'
target: GRMZM2G106363_T01
miRNA: zma-miR2275d-3p
miRNA: zma-miR2275d-3p
mfe: -27.7 kcal/mol
p-value: 0.006005
position: 202
target 5' A C G G 3'
UGAGG UGU GGAGGAGGACGAG
ACUCU AUA UCUCCUUUUGUUU
miRNA 3' A 5'
target: GRMZM2G106363_T02
miRNA: zma-miR2275a-3p
miRNA: zma-miR2275a-3p
mfe: -29.5 kcal/mol
p-value: 0.000436
position: 202
target 5' A C G G 3'
UGAGG UGU GGAGGAGGACGAG
ACUCU AUA CCUCCUUUUGUUU
miRNA 3' A 5'
target: GRMZM2G106363_T02
miRNA: zma-miR2275d-3p
miRNA: zma-miR2275d-3p
mfe: -27.7 kcal/mol
p-value: 0.001551
position: 202
target 5' A C G G 3'
UGAGG UGU GGAGGAGGACGAG
ACUCU AUA UCUCCUUUUGUUU
miRNA 3' A 5'
|
|
| Cross Link | |
|
|
