Basic information
Locus name	GRMZM2G151223
Organism	Maize (Zea mays)
Taxonomic identifier	[NCBI]
Function category	hormone metabolism.cytokinin.signal transduction
Effect for Senescence	unclear
Gene Description	Expression level was up-regulated at 18 DAA (Day After Anthesis)or later.
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Sekhon RS, Childs KL, Santoro N, Foster CE, Buell CR, de Leon N, Kaeppler SM Transcriptional and metabolic analysis of senescence induced by preventing pollination in maize. Plant Physiol. 2012 Aug;159(4):1730-44
Gene Ontology	biological process oxidation-reduction process response to oxidative stress molecular function heme binding peroxidase activity
Pathway	KEGG map00360 (EC 1.11.1.7) map00680 (EC 1.11.1.7) map00940 (EC 1.11.1.7) MetaCyc PWY-5461
Sequence	GRMZM2G151223_T01 | Genomic | mRNA | CDS | Protein GRMZM2G151223_T02 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: GRMZM2G151223_T01  miRNA: zma-miR2275b-3p miRNA: zma-miR2275b-3p mfe: -30.9 kcal/mol  p-value: 0.001371  position: 403  target 5' A      G             C  3'             GAGGUG UGGAGGGGGCUGG                 CUCUAU AUCUCCUUUGACU      miRNA  3' A      A             U  5'  target: GRMZM2G151223_T01  miRNA: zma-miR2275c-3p miRNA: zma-miR2275c-3p mfe: -30.9 kcal/mol  p-value: 0.003498  position: 403  target 5' A      G             C  3'             GAGGUG UGGAGGGGGCUGG                 CUCUAU AUCUCCUUUGACU      miRNA  3' A      A             U  5'  target: GRMZM2G151223_T02  miRNA: zma-miR2275b-3p miRNA: zma-miR2275b-3p mfe: -30.9 kcal/mol  p-value: 0.000444  position: 403  target 5' A      G             C  3'             GAGGUG UGGAGGGGGCUGG                 CUCUAU AUCUCCUUUGACU      miRNA  3' A      A             U  5'  target: GRMZM2G151223_T02  miRNA: zma-miR2275c-3p miRNA: zma-miR2275c-3p mfe: -30.9 kcal/mol  p-value: 0.001900  position: 403  target 5' A      G             C  3'             GAGGUG UGGAGGGGGCUGG                 CUCUAU AUCUCCUUUGACU      miRNA  3' A      A             U  5'
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR31517 8.5E-163 1 300 No hit NA ProSiteProfiles PS50873 62.2 25 300 IPR002016 Haem peroxidase, plant/fungal/bacterial SUPERFAMILY SSF48113 2.8E-83 25 300 IPR010255 Haem peroxidase PRINTS PR00461 7.3E-35 35 54 IPR000823 Plant peroxidase Pfam PF00141 1.4E-55 42 263 IPR002016 Haem peroxidase, plant/fungal/bacterial PRINTS PR00458 8.2E-23 57 71 IPR002016 Haem peroxidase, plant/fungal/bacterial ProSitePatterns PS00436 NA 57 68 IPR019794 Peroxidase, active site PRINTS PR00461 7.3E-35 59 79 IPR000823 Plant peroxidase PRINTS PR00461 7.3E-35 100 113 IPR000823 Plant peroxidase PRINTS PR00461 7.3E-35 121 131 IPR000823 Plant peroxidase PRINTS PR00458 8.2E-23 122 139 IPR002016 Haem peroxidase, plant/fungal/bacterial PRINTS PR00458 8.2E-23 140 152 IPR002016 Haem peroxidase, plant/fungal/bacterial PRINTS PR00461 7.3E-35 140 155 IPR000823 Plant peroxidase PRINTS PR00461 7.3E-35 187 199 IPR000823 Plant peroxidase PRINTS PR00458 8.2E-23 188 203 IPR002016 Haem peroxidase, plant/fungal/bacterial ProSitePatterns PS00435 NA 188 198 IPR019793 Peroxidases heam-ligand binding site