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About
Basic information
Locus name
GRMZM2G170013
Organism
Maize (
Zea mays
)
Taxonomic identifier
[NCBI]
Function category
misc.short chain dehydrogenase/reductase (SDR)
Effect for Senescence
unclear
Gene Description
Expression level was up-regulated at 18 DAA (Day After Anthesis)or later.
Evidence
Genomic evidence:microarray data [Ref 1]
References
1: Sekhon RS, Childs KL, Santoro N, Foster CE, Buell CR, de Leon N, Kaeppler SM
Transcriptional and metabolic analysis of senescence induced by preventing pollination in maize.
Plant Physiol. 2012 Aug;159(4):1730-44
Gene Ontology
biological process
nicotianamine biosynthetic process
molecular function
nicotianamine synthase activity
Pathway
MetaCyc
PWY-5957
Sequence
GRMZM2G170013_T01 |
Genomic
|
mRNA
|
CDS
|
Protein
GRMZM2G170013_T02 |
Genomic
|
mRNA
|
CDS
|
Protein
Cross Link
Database
Entry ID
E-value
Start
End
InterPro ID
Description
ProSiteProfiles
PS51142
65.1
3
282
IPR004298
Nicotianamine synthase
Pfam
PF03059
2.4E-130
4
280
IPR004298
Nicotianamine synthase
SUPERFAMILY
SSF53335
7.8E-12
84
258
No hit
NA
PANTHER
PTHR32266
2.3E-203
282
599
No hit
NA
Pfam
PF03059
1.3E-127
283
558
IPR004298
Nicotianamine synthase
ProSiteProfiles
PS51142
60.8
283
560
IPR004298
Nicotianamine synthase
SUPERFAMILY
SSF53335
5.8E-7
362
530
No hit
NA