Basic information
Locus name	GRMZM2G451792
Organism	Maize (Zea mays)
Taxonomic identifier	[NCBI]
Function category	transport.ABC transporters and multidrug resistance systems
Effect for Senescence	unclear
Gene Description	Expression level was up-regulated at 18 DAA (Day After Anthesis)or later.
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Sekhon RS, Childs KL, Santoro N, Foster CE, Buell CR, de Leon N, Kaeppler SM Transcriptional and metabolic analysis of senescence induced by preventing pollination in maize. Plant Physiol. 2012 Aug;159(4):1730-44
Gene Ontology	biological process coenzyme A metabolic process oxidation-reduction process molecular function coenzyme binding hydroxymethylglutaryl-CoA reductase (NADPH) activity
Pathway	KEGG map00900 (EC 1.1.1.34) MetaCyc PWY-922
Sequence	GRMZM2G451792_T01 | Genomic | mRNA | CDS | Protein GRMZM2G451792_T02 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: GRMZM2G451792_T01  miRNA: zma-miR156d-3p miRNA: zma-miR156d-3p mfe: -34.2 kcal/mol  p-value: 0.003196  position: 98  target 5' U  G     U          C     G  3'             GC UGACA GAAAGAGAAG UGGGC                 CG ACUGU CUUUCUCUUC ACUCG      miRNA  3'                              5'  target: GRMZM2G451792_T01  miRNA: zma-miR156f-3p miRNA: zma-miR156f-3p mfe: -34.2 kcal/mol  p-value: 0.002863  position: 98  target 5' U  G     U          C     G  3'             GC UGACA GAAAGAGAAG UGGGC                 CG ACUGU CUUUCUCUUC ACUCG      miRNA  3'                              5'  target: GRMZM2G451792_T01  miRNA: zma-miR156g-3p miRNA: zma-miR156g-3p mfe: -34.2 kcal/mol  p-value: 0.003325  position: 98  target 5' U  G     U          C     G  3'             GC UGACA GAAAGAGAAG UGGGC                 CG ACUGU CUUUCUCUUC ACUCG      miRNA  3'                              5'  target: GRMZM2G451792_T01  miRNA: zma-miR156k-3p miRNA: zma-miR156k-3p mfe: -35.7 kcal/mol  p-value: 0.003211  position: 98  target 5' U  G     U           U    G  3'             GC UGACA GAAAGAGAAGC GGGC                 CG ACUGU CUUUCUCUUCG CUCG      miRNA  3'                              5'
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR10572 9.1E-300 42 566 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II SUPERFAMILY SSF56542 7.6E-102 152 273 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding ProSiteProfiles PS50065 139.2 155 559 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II TIGRFAM TIGR00533 7.5E-159 155 559 IPR004554 Hydroxymethylglutaryl-CoA reductase, eukaryotic/arcaheal type Pfam PF00368 4.5E-162 181 559 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II PRINTS PR00071 8.0E-86 215 236 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II PRINTS PR00071 8.0E-86 242 262 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II SUPERFAMILY SSF55035 8.4E-47 276 392 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding PRINTS PR00071 8.0E-86 333 351 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II ProSitePatterns PS00066 NA 335 349 IPR023076 Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site PRINTS PR00071 8.0E-86 373 398 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II SUPERFAMILY SSF56542 7.6E-102 390 549 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding PRINTS PR00071 8.0E-86 424 450 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II PRINTS PR00071 8.0E-86 478 499 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II ProSitePatterns PS00318 NA 490 497 IPR023076 Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site