Basic information   
Locus name LOC_Os05g10670
AliasOsTZF1
OrganismRice (Oryza sativa)
Taxonomic identifier[NCBI]
Function categoryTranscription regulation
Effect for Senescencedelay
Gene DescriptionOsTZF1 is a member of the CCCH-type zinc finger gene family in rice (Oryza sativa).
EvidenceGenetic evidence:Transgene [Ref 1]
References
1: Jan A, Maruyama K, Todaka D, Kidokoro S, Abo M, Yoshimura E, Shinozaki K, Nakashima K, Yamaguchi-Shinozaki K
OsTZF1, a CCCH-tandem zinc finger protein, confers delayed senescence and stress tolerance in rice by regulating stress-related genes.
Plant Physiol. 2013 Mar;161(3):1202-16

Gene Ontology
molecular function
SequenceLOC_Os05g10670.1 | Genomic | mRNA | CDS | Protein
Mutant information   
Mutated 1
Mutant name OsTZF1-RNAi
Mutant/Transgenic transgenic
Ecotype Rice (Oryza sativa)
Mutagenesis type transgene
Mutated 2
Mutant name OsTZF1ox
Mutant/Transgenic transgenic
Ecotype Rice (Oryza sativa)
Mutagenesis type transgene
miRNA Interaction      
Details
target: LOC_Os05g10670.1 
miRNA: osa-miR5075
miRNA: osa-miR5075
mfe: -45.0 kcal/mol 
p-value: 0.000000 

position: 341 
target 5' A  A                  U 3' 
           CG GGCGGCGGCGGCGGAGGA     
           GC CUGCCGCCGCUGCCUCUU     
miRNA  3' C                       5' 

target: LOC_Os05g10670.1 
miRNA: osa-miR530-5p
miRNA: osa-miR530-5p
mfe: -31.9 kcal/mol 
p-value: 0.000000 

position: 568 
target 5' A               C   G 3' 
           AGG GCGGGUGCAAG GCG     
           UCC CGUCCACGUUU CGU     
miRNA  3' A   A           A     5' 
Cross Link      
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR144936.0E-86133438No hitNA
SMARTSM003560.0179205IPR000571Zinc finger, CCCH-type
ProSiteProfilesPS5010313.2180206IPR000571Zinc finger, CCCH-type
PfamPF006424.5E-6184204IPR000571Zinc finger, CCCH-type
ProSiteProfilesPS501036.3214238IPR000571Zinc finger, CCCH-type
SMARTSM0035612.0214237IPR000571Zinc finger, CCCH-type