Basic information
Locus name	AT5G17450
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Nutrient recycling:metal ion transport
Effect for Senescence	unclear
Gene Description	heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4):567-85
Gene Ontology	biological process metal ion transport molecular function metal ion binding
Sequence	AT5G17450.1 | Genomic | mRNA | CDS | Protein AT5G17450.2 | Genomic | mRNA | CDS | Protein
Microarray
Sampling	Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ. Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4)
Comparation	Legends: Col: wild type, indicates the ratio of expression in senescing leaves/green leaves. NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type. Genes showing at least 3 fold (ratio) up regulation during leaf senescence.
Ortholog Group
Ortholog Groups: OG5_212788	Accession Taxon NP_197247 ( AT5G17450 ) Arabidopsis thaliana NP_974795 Arabidopsis thaliana
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR22814 7.2E-83 21 142 No hit NA SUPERFAMILY SSF55008 6.0E-17 26 91 IPR006121 Heavy metal-associated domain, HMA Pfam PF00403 1.1E-12 31 86 IPR006121 Heavy metal-associated domain, HMA ProSiteProfiles PS50846 12.4 34 89 IPR006121 Heavy metal-associated domain, HMA