Basic information
Locus name	At1g34180
Alias	NAC016
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Transcription regulation:NAC
Effect for Senescence	promote
Gene Description	a senescence-associated NAM/ATAF1/2/CUC2 (senNAC) TF
Evidence	Genetic evidence:Mutant [Ref 1]
References	1: Kim YS, Sakuraba Y, Han SH, Yoo SC, Paek NC. Mutation of the Arabidopsis NAC016 transcription factor delays leaf senescence. Plant Cell Physiol. 2013 Oct;54(10):1660-72. doi: 10.1093/pcp/pct113. Epub 2013 Aug 7.
Gene Ontology	biological process regulation of transcription, DNA-dependent molecular function DNA binding
Sequence	AT1G34180.1 | mRNA | CDS | Protein AT1G34180.2 | mRNA | CDS | Protein AT1G34180.3 | mRNA | CDS | Protein AT1G34180.4 | mRNA | CDS | Protein
Mutant information
Mutated 1 Mutant name nac016-1 Mutant/Transgenic mutant Ecotype Col-0 Mutagenesis type T-DNA
Mutated 2 Mutant name NAC016-OX Mutant/Transgenic transgene Ecotype Col-0 Mutagenesis type transgenic
Mutated 3 Mutant name nac016-1 Mutant/Transgenic Ecotype Col-0 Mutagenesis type T-DNA
Mutated 4 Mutant name NAC016-OX Mutant/Transgenic Ecotype Col-0 Mutagenesis type transgene
Microarray
Sampling	Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ. Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4)
Comparation	Legends: Col: wild type, indicates the ratio of expression in senescing leaves/green leaves. NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type. D/L: ratio of DARK 5d/control. CD: Cell Death, ratio of starved cell suspension culture/control. Genes showing at least 3 fold (ratio) up regulation during leaf senescence.
Ortholog Group
Ortholog Groups: OG5_160025	Accession Taxon NP_001077648 ( At1g34180 ) Arabidopsis thaliana NP_001117401 Arabidopsis thaliana NP_564410 Arabidopsis thaliana NP_564439 Arabidopsis thaliana NP_564440 Arabidopsis thaliana NP_001063547 Oryza sativa Japonica Group 28644.m000924 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR31989 4.6E-126 4 560 No hit NA ProSiteProfiles PS51005 52.7 16 166 IPR003441 No apical meristem (NAM) protein Pfam PF02365 1.8E-46 17 143 IPR003441 No apical meristem (NAM) protein SUPERFAMILY SSF101941 8.6E-55 17 166 IPR003441 No apical meristem (NAM) protein
Mutant Image
nac16 mutants exhibited slight delay senescence phenotype compared with wild type.