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About
Basic information
Locus name
AT5G64810
Alias
WRKY51
Organism
Arabidopsis thaliana
Taxonomic identifier
[NCBI]
Function category
Transcription regulation:WRKY
Effect for Senescence
unclear
Gene Description
member of WRKY Transcription Factor; Group II-c,WRKY DNA-BINDING PROTEIN 51 (WRKY51).
Evidence
Molecular evidence:cDNA library [Ref 1]
References
1: Y.GUO, Z.CAI, S.GAN.
Transcriptome of Arabidopsis leaf senescence.
Plant, Cell & Environment 2004, 27(5):521-549.
Gene Ontology
biological process
regulation of transcription, DNA-dependent
molecular function
sequence-specific DNA binding transcription factor activity
sequence-specific DNA binding
Sequence
AT5G64810.1 |
Genomic
|
mRNA
|
CDS
|
Protein
miRNA Interaction
Details
target: AT5G64810.1
miRNA:
ath-miR1886
miRNA:
ath-miR1886
mfe: -21.9 kcal/mol
p-value: 0.007050
position: 523
target 5' A G U U 3'
CAAU AAA GGUUUUAUCUUA
GUUA UUU CUAAAGUAGAGU
miRNA 3' G G 5'
target: AT5G64810.1
miRNA:
ath-miR414
miRNA:
ath-miR414
mfe: -23.8 kcal/mol
p-value: 0.005253
position: 316
target 5' A U U U 3'
GA UGAUG UGAUGGA GAUGG
CU GCUAC ACUACUU CUACU
miRNA 3' A U 5'
Ortholog Group
Ortholog Groups:
OG5_132609
Accession
Taxon
NP_174279
Arabidopsis thaliana
NP_177090
Arabidopsis thaliana
NP_182248
Arabidopsis thaliana
NP_193551
Arabidopsis thaliana
NP_199447
Arabidopsis thaliana
NP_199763
Arabidopsis thaliana
NP_566025
Arabidopsis thaliana
NP_568995
( AT5G64810 )
Arabidopsis thaliana
NP_974112
Arabidopsis thaliana
NP_001043628
Oryza sativa Japonica Group
NP_001043797
Oryza sativa Japonica Group
NP_001051329
Oryza sativa Japonica Group
NP_001053464
Oryza sativa Japonica Group
NP_001058737
Oryza sativa Japonica Group
e_gw1.140.97.1
Physcomitrella patens subsp. patens
e_gw1.159.68.1
Physcomitrella patens subsp. patens
e_gw1.235.59.1
Physcomitrella patens subsp. patens
e_gw1.25.129.1
Physcomitrella patens subsp. patens
e_gw1.35.333.1
Physcomitrella patens subsp. patens
e_gw1.39.143.1
Physcomitrella patens subsp. patens
e_gw1.407.30.1
Physcomitrella patens subsp. patens
e_gw1.73.71.1
Physcomitrella patens subsp. patens
gw1.109.45.1
Physcomitrella patens subsp. patens
gw1.115.63.1
Physcomitrella patens subsp. patens
gw1.137.58.1
Physcomitrella patens subsp. patens
gw1.166.27.1
Physcomitrella patens subsp. patens
gw1.198.128.1
Physcomitrella patens subsp. patens
gw1.244.25.1
Physcomitrella patens subsp. patens
gw1.39.164.1
Physcomitrella patens subsp. patens
gw1.426.49.1
Physcomitrella patens subsp. patens
gw1.5.658.1
Physcomitrella patens subsp. patens
29693.m002060
Ricinus communis
29771.m000072
Ricinus communis
29889.m003321
Ricinus communis
30076.m004623
Ricinus communis
30174.m009135
Ricinus communis
Cross Link
Database
Entry ID
E-value
Start
End
InterPro ID
Description
PANTHER
PTHR31221
5.1E-28
97
167
No hit
NA
SUPERFAMILY
SSF118290
8.0E-26
101
167
IPR003657
DNA-binding WRKY
ProSiteProfiles
PS50811
27.4
104
169
IPR003657
DNA-binding WRKY
Pfam
PF03106
2.2E-25
109
167
IPR003657
DNA-binding WRKY
SMART
SM00774
1.8E-31
109
168
IPR003657
DNA-binding WRKY
Mutant Image
wrky51 mutant exhibited slightly delay senescence.
Subcellular Localization
Localization
nucleus
Evidence
SUBAcon
Pubmed ID
23180787