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Locus name | AT1G19220 |
Alias | ARF19 |
Organism | Arabidopsis thaliana |
Taxonomic identifier | [NCBI] |
Function category | Hormone response pathway:Auxin |
Effect for Senescence | promote |
Gene Description | Encodes an auxin response factor 19. |
Evidence | Genetic evidence:Mutant [Ref 1] |
References | 1: Ellis CM, Nagpal P, Young JC, Hagen G, Guilfoyle TJ, Reed JWAUXIN RESPONSE FACTOR1 and AUXIN RESPONSE FACTOR2 regulate senescence and floral organ abscission in Arabidopsis thaliana.Development 2005 Oct;132(20):4563-74 |
Gene Ontology | |
Sequence | AT1G19220.1 | Genomic | mRNA | CDS | Protein
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Mutant name |
arf2-8 nph4-1 arf19-4 |
Mutant/Transgenic |
mutant |
Ecotype |
Col-0 |
Mutagenesis type |
cross |
miRNA Interaction | |
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Details | | target: AT1G19220.1 miRNA: ath-miR778 miRNA: ath-miR778 mfe: -25.5 kcal/mol p-value: 0.043868
position: 1331 target 5' A C G G A 3' G UG A AUAGGCCAAGCCG C AC U UAUUUGGUUCGGU miRNA 3' G C A G 5'
target: AT1G19220.1 miRNA: ath-miR834 miRNA: ath-miR834 mfe: -28.1 kcal/mol p-value: 0.028759
position: 1909 target 5' G G A A 3' UAC AUUGCUGUUGCU ACCA AUG UGGCGAUGACGA UGGU miRNA 3' A G 5'
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Ortholog Group | |
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Ortholog Groups: OG5_144184 | |
Cross Link | |
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Localization | nucleus |
Evidence | SUBAcon |
Pubmed ID | 23180787 |