Basic information   
Locus name AT1G53910
OrganismArabidopsis thaliana
Taxonomic identifier[NCBI]
Function categoryTranscription regulation:AP2-EREBP
Effect for Senescenceunclear
Gene DescriptionAP2 domain-containing protein RAP2.12 (RAP2.12)
EvidenceGenomic evidence:microarray data [Ref 1]
References
1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4):567-85

Gene Ontology
biological process
molecular function
SequenceAT1G53910.1 | Genomic | mRNA | CDS | Protein
AT1G53910.2 | Genomic | mRNA | CDS | Protein
AT1G53910.3 | Genomic | mRNA | CDS | Protein
Microarray   
Sampling Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ.
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4)
Comparation Legends:
Col: wild type, indicates the ratio of expression in senescing leaves/green leaves.
NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type.
D/L: ratio of DARK 5d/control.
CD: Cell Death, ratio of starved cell suspension culture/control.
Genes showing at least 3 fold (ratio) up regulation during leaf senescence.
Ortholog Group      
Ortholog Groups: OG5_150202
AccessionTaxon
NP_001031185 ( AT1G53910 ) Arabidopsis thaliana
NP_001077718Arabidopsis thaliana
NP_175794Arabidopsis thaliana
NP_566482Arabidopsis thaliana
NP_850582Arabidopsis thaliana
NP_850583Arabidopsis thaliana
NP_001048319Oryza sativa Japonica Group
NP_001057044Oryza sativa Japonica Group
NP_001063252Oryza sativa Japonica Group
27585.m000144Ricinus communis
Cross Link      
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR311901.7E-872351No hitNA
PfamPF008471.6E-17122171IPR001471AP2/ERF domain
ProSiteProfilesPS5103224.4122179IPR001471AP2/ERF domain
SMARTSM003802.1E-37122185IPR001471AP2/ERF domain
SUPERFAMILYSSF541712.3E-22122180IPR016177DNA-binding, integrase-type
PRINTSPR003671.1E-11123134IPR001471AP2/ERF domain
PRINTSPR003671.1E-11145161IPR001471AP2/ERF domain
Subcellular Localization   
Localizationnucleus
EvidenceSUBAcon
Pubmed ID23180787