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| Locus name | AT1G55760 |
| Organism | Arabidopsis thaliana |
| Taxonomic identifier | [NCBI] |
| Function category | Others |
| Effect for Senescence | unclear |
| Gene Description | BTB/POZ domain-containing protein |
| Evidence | Genomic evidence:microarray data [Ref 1] |
| References | 1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJComparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.Plant J. 2005 May;42(4):567-85 |
| Gene Ontology | |
| Sequence | AT1G55760.1 | Genomic | mRNA | CDS | Protein
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| Sampling |
Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ.
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4) |
| Comparation |
Legends:
Col: wild type, indicates the ratio of expression in senescing leaves/green leaves.
NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type.
Genes showing at least 3 fold (ratio) up regulation during leaf senescence. |
miRNA Interaction  | |
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| Details | | target: AT1G55760.1
miRNA: ath-miR1886
miRNA: ath-miR1886
mfe: -21.5 kcal/mol
p-value: 0.032786
position: 1475
target 5' G A G U 3'
CAG CAGAGAUUU AUUUC
GUU GUUUCUAAA UAGAG
miRNA 3' G A G U 5'
target: AT1G55760.1
miRNA: ath-miR866-3p
miRNA: ath-miR866-3p
mfe: -21.2 kcal/mol
p-value: 0.057762
position: 641
target 5' C C C G 3'
CUUU AAGAUGGGU UUUG
GAAG UUCUGCCUA AAAC
miRNA 3' A U A 5'
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| Ortholog Group | |
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| Ortholog Groups: OG5_189873 | |
| Cross Link | |
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