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| Locus name | AT3G51960 |
| Organism | Arabidopsis thaliana |
| Taxonomic identifier | [NCBI] |
| Function category | Transcription regulation:bZIP |
| Effect for Senescence | unclear |
| Gene Description | bZIP family transcription factor |
| Evidence | Genomic evidence:microarray data [Ref 1] |
| References | 1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJComparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.Plant J. 2005 May;42(4):567-85 |
| Gene Ontology | |
| Sequence | AT3G51960.1 | Genomic | mRNA | CDS | Protein
AT3G51960.2 | Genomic | mRNA | CDS | Protein
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| Sampling |
Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ.
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4) |
| Comparation |
Legends:
Col: wild type, indicates the ratio of expression in senescing leaves/green leaves.
NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type.
Genes showing at least 3 fold (ratio) up regulation during leaf senescence. |
miRNA Interaction  | |
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| Details | | target: AT3G51960.1
miRNA: ath-miR1888
miRNA: ath-miR1888
mfe: -20.2 kcal/mol
p-value: 0.032424
position: 151
target 5' U G G U 3'
UUCUUUG AGAUCUUGA UU
AAGAAGU UUUAGAAUU AA
miRNA 3' G G U 5'
target: AT3G51960.2
miRNA: ath-miR1888
miRNA: ath-miR1888
mfe: -20.2 kcal/mol
p-value: 0.032557
position: 151
target 5' U G G U 3'
UUCUUUG AGAUCUUGA UU
AAGAAGU UUUAGAAUU AA
miRNA 3' G G U 5'
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| Ortholog Group | |
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| Ortholog Groups: OG5_211300 | |
| Cross Link | |
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| Localization | nucleus |
| Evidence | SUBAcon |
| Pubmed ID | 23180787 |
