Basic information   
GenBank ID NM_001112301
AliasZmSGR2
OrganismMaize (Zea mays)
Taxonomic identifier[NCBI]
Function categoryChlorophyll degradation
Effect for Senescencepromote
Gene DescriptionStay green protein
EvidenceMolecular evidence [Ref 1]
References
1: Sato Y, Morita R, Nishimura M, Yamaguchi H, Kusaba M
Mendel's green cotyledon gene encodes a positive regulator of the chlorophyll-degrading pathway.
Proc. Natl. Acad. Sci. U.S.A. 2007 Aug 28;104(35):14169-74

SequenceNM_001112301.1 | mRNA | CDS | Protein
miRNA Interaction      
Details
target: NM_001112301.1 
miRNA: zma-miR166n
miRNA: zma-miR166n
mfe: -29.8 kcal/mol 
p-value: 0.047895 

position:  873 
target 5' G                    A 3' 
           GCCG GCCAGAUGAUGG CC  
           UGGC CGGUCUGUUGUU GG  
miRNA  3' G    U            A    5' 

target: NM_001112301.1 
miRNA: zma-miR169c
miRNA: zma-miR169c
mfe: -32.8 kcal/mol 
p-value: 0.009826 

position:  109 
target 5' A        U          U  C 3' 
           GUGGCCAG GGGCAGAUUU CU  
           CAUCGGUU CCUGUCUGAA GG  
miRNA  3' A                   C    5' 

target: NM_001112301.1 
miRNA: zma-miR169f
miRNA: zma-miR169f
mfe: -27.8 kcal/mol 
p-value: 0.056045 

position:  545 
target 5' U       G  U     A G    G 3' 
           GGUGGCC AG GGAAG A GUGC  
           UCAUCGG UU CCUUC U UACG  
miRNA  3'                    G    G 5' 

target: NM_001112301.1 
miRNA: zma-miR399f
miRNA: zma-miR399f
mfe: -25.8 kcal/mol 
p-value: 0.001408 

position:  116 
target 5' A U              C   C 3' 
           G GGGCAGAUUUUC U GGC  
           C CCCGUUUAAAGG A CCG  
miRNA  3' G              A A   U 5' 
Cross Link      
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR317504.6E-10325272No hitNA
PfamPF126384.0E-6152207IPR024438Staygreen protein