Basic information
Locus name	AT1G76810
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Transcription regulation:eIF-2 family
Effect for Senescence	unclear
Gene Description	eukaryotic translation initiation factor 2 family protein / eIF-2 family
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4):567-85
Gene Ontology	molecular function GTP binding GTPase activity
Sequence	AT1G76810.1 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: AT1G76810.1  miRNA: ath-miR837-5p miRNA: ath-miR837-5p mfe: -27.2 kcal/mol  p-value: 0.023849  position:  2406  target 5' A    G  C           A 3'             GAGA GA CAAGGAACUGA              CUUU CU GUUCUUUGACU   miRNA  3' A    G  U           A 5'  target: AT1G76810.1  miRNA: ath-miR858 miRNA: ath-miR858 mfe: -25.7 kcal/mol  p-value: 0.070478  position:  1826  target 5' U     U        C     A 3'             GGGUU AACAGACA UGGAA              UCCAG UUGUCUGU GCUUU   miRNA  3' U     C        U       5'
Ortholog Group
Ortholog Groups: OG5_127312	Accession Taxon NP_001118399 Arabidopsis thaliana NP_173540 Arabidopsis thaliana NP_177798 Arabidopsis thaliana NP_177807 ( AT1G76810 ) Arabidopsis thaliana NP_180338 Arabidopsis thaliana NP_565140 Arabidopsis thaliana CML150C Cyanidioschyzon merolae strain 10D 141272 Chlamydomonas reinhardtii ACO68578 Micromonas sp. RCC299 NP_001056497 Oryza sativa Japonica Group e_gw1.03.00.98.1 Ostreococcus tauri e_gw1.247.8.1 Physcomitrella patens subsp. patens 29701.m000590 Ricinus communis fgenesh1_pm.C_chr_2000043 Thalassiosira pseudonana CCMP1335 XP_002954887 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR23115 0.0 199 1293 No hit NA Coils Coil NA 343 374 No hit NA Coils Coil NA 409 493 No hit NA SUPERFAMILY SSF52540 6.6E-65 704 994 IPR027417 P-loop containing nucleoside triphosphate hydrolase Pfam PF00009 7.7E-33 706 914 IPR000795 Elongation factor, GTP-binding domain PRINTS PR00315 1.4E-7 707 720 IPR000795 Elongation factor, GTP-binding domain TIGRFAM TIGR00231 1.9E-16 708 868 IPR005225 Small GTP-binding protein domain PRINTS PR00315 1.4E-7 771 781 IPR000795 Elongation factor, GTP-binding domain PRINTS PR00315 1.4E-7 787 798 IPR000795 Elongation factor, GTP-binding domain PRINTS PR00315 1.4E-7 823 832 IPR000795 Elongation factor, GTP-binding domain Pfam PF03144 2.9E-10 942 1019 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 SUPERFAMILY SSF52156 2.0E-34 1028 1157 IPR023115 Translation initiation factor IF- 2, domain 3 Pfam PF11987 1.8E-19 1038 1144 IPR023115 Translation initiation factor IF- 2, domain 3 SUPERFAMILY SSF50447 3.5E-31 1162 1293 IPR009000 Translation elongation/initiation factor/Ribosomal, beta-barrel
Subcellular Localization
Localization	cytosol
Evidence	SUBAcon
Pubmed ID	23180787