Basic information
Locus name	AT4G36990
Alias	HSF4
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Transcription regulation:HSF
Effect for Senescence	unclear
Gene Description	heat shock factor protein 4 (HSF4)
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4):567-85
Gene Ontology	biological process regulation of transcription, DNA-dependent cellular component nucleus molecular function sequence-specific DNA binding transcription factor activity sequence-specific DNA binding
Sequence	AT4G36990.1 | Genomic | mRNA | CDS | Protein
Microarray
Sampling	Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ. Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4)
Comparation	Legends: Col: wild type, indicates the ratio of expression in senescing leaves/green leaves. NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type. D/L: ratio of DARK 5d/control. CD: Cell Death, ratio of starved cell suspension culture/control. Genes showing at least 3 fold (ratio) up regulation during leaf senescence.
Ortholog Group
Ortholog Groups: OG5_129203	Accession Taxon NP_191894 Arabidopsis thaliana NP_193623 Arabidopsis thaliana NP_195416 ( AT4G36990 ) Arabidopsis thaliana NP_113340 Guillardia theta e_gw1.20.00.75.1 Ostreococcus tauri estExt_Genewise1.C_310312 Physcomitrella patens subsp. patens gw1.42.207.1 Physcomitrella patens subsp. patens 29636.m000750 Ricinus communis 30026.m001484 Ricinus communis estExt_fgenesh1_pg.C_chr_100042 Thalassiosira pseudonana CCMP1335
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR10015 8.9E-68 8 184 No hit NA SMART SM00415 6.5E-58 11 104 IPR000232 Heat shock factor (HSF)-type, DNA-binding SUPERFAMILY SSF46785 3.2E-33 12 104 No hit NA Pfam PF00447 3.8E-33 15 106 IPR000232 Heat shock factor (HSF)-type, DNA-binding PRINTS PR00056 2.8E-20 15 38 IPR000232 Heat shock factor (HSF)-type, DNA-binding PRINTS PR00056 2.8E-20 53 65 IPR000232 Heat shock factor (HSF)-type, DNA-binding PRINTS PR00056 2.8E-20 66 78 IPR000232 Heat shock factor (HSF)-type, DNA-binding Coils Coil NA 149 184 No hit NA
Subcellular Localization
Localization	nucleus
Evidence	SUBAcon
Pubmed ID	23180787