Basic information
Locus name	AT3G29035
Alias	ANAC059/ATNAC3/ORS1
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Transcription regulation:NAC
Effect for Senescence	promote
Gene Description	no apical meristem (NAM) family protein
Evidence	Genomic evidence:microarray data [Ref 1]; Genetic evidence: mutant and transgene [Ref 2]
References	1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4):567-85 2: Balazadeh S, Kwasniewski M, Caldana C, Mehrnia M, Zanor MI, Xue GP, Mueller-Roeber B ORS1, an H_O_-responsive NAC transcription factor, controls senescence in Arabidopsis thaliana. Mol Plant 2011 Mar;4(2):346-60
Gene Ontology	biological process regulation of transcription, DNA-dependent molecular function DNA binding
Sequence	AT3G29035.1 | Genomic | mRNA | CDS | Protein
Mutant information
Mutated 1 Mutant name ors1-1 Mutant/Transgenic mutant Ecotype Col-0 Mutagenesis type T-DNA insertion_knock out
Mutated 2 Mutant name ORS1 RNAi line Mutant/Transgenic mutant Ecotype Col-0 Mutagenesis type RNAi
Mutated 3 Mutant name 35S:ORS1 Mutant/Transgenic transgenic Ecotype Col-0 Mutagenesis type Transgene
Mutated 4 Mutant name ors1-1/anac092-1 Mutant/Transgenic mutant Ecotype Col-0 Mutagenesis type T-DNA insertion_knock out
Microarray
Sampling	Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ. Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4)
Comparation	Legends: Col: wild type, indicates the ratio of expression in senescing leaves/green leaves. NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type. D/L: ratio of DARK 5d/control. Genes showing at least 3 fold (ratio) up regulation during leaf senescence.
miRNA Interaction
Details	target: AT3G29035.1  miRNA: ath-miR399a miRNA: ath-miR399a mfe: -28.3 kcal/mol  p-value: 0.006035  position:  521  target 5' A              G      U 3'             AGGG AAAUCUCUU UUGGUA              UCCC UUUAGAGGA AACCGU   miRNA  3' G    G                  5'  target: AT3G29035.1  miRNA: ath-miR838 miRNA: ath-miR838 mfe: -24.9 kcal/mol  p-value: 0.011577  position:  196  target 5' A  G G    U            A 3'             GU G GAGA AGUAGAAGGAGA              CA C UUCU UCAUCUUCUUUU   miRNA  3' A    G                   5'
Ortholog Group
Ortholog Groups: OG5_212463	Accession Taxon NP_189546 ( AT3G29035 ) Arabidopsis thaliana NP_198777 Arabidopsis thaliana
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR31744 2.5E-157 5 316 No hit NA SUPERFAMILY SSF101941 1.8E-61 21 174 IPR003441 No apical meristem (NAM) protein Pfam PF02365 3.4E-54 24 150 IPR003441 No apical meristem (NAM) protein ProSiteProfiles PS51005 57.0 24 174 IPR003441 No apical meristem (NAM) protein
Subcellular Localization
Localization	nucleus
Evidence	SUBAcon
Pubmed ID	23180787