Basic information
Locus name	AT2G43000
Alias	ANAC042
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Transcription regulation:NAC
Effect for Senescence	unclear
Gene Description	no apical meristem (NAM) family protein
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4):567-85
Gene Ontology	biological process regulation of transcription, DNA-dependent molecular function DNA binding
Sequence	AT2G43000.1 | Genomic | mRNA | CDS | Protein
Mutant information
Mutated 1 Mutant name 35S-JUB1 Mutant/Transgenic transgenic Ecotype Col-0 Mutagenesis type transgene
Mutated 2 Mutant name jub1-1 Mutant/Transgenic mutant Ecotype Col-0 Mutagenesis type T-DNA insertion_knock out
Microarray
Sampling	Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ. Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4)
Comparation	Legends: Col: wild type, indicates the ratio of expression in senescing leaves/green leaves. NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type. CD: Cell Death, ratio of starved cell suspension culture/control. Genes showing at least 3 fold (ratio) up regulation during leaf senescence.
Ortholog Group
Ortholog Groups: OG5_190119	Accession Taxon NP_181828 ( AT2G43000 ) Arabidopsis thaliana NP_001051438 Oryza sativa Japonica Group 30169.m006343 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR31555 2.1E-147 1 274 No hit NA ProSiteProfiles PS51005 53.1 18 167 IPR003441 No apical meristem (NAM) protein SUPERFAMILY SSF101941 1.7E-55 19 166 IPR003441 No apical meristem (NAM) protein Pfam PF02365 1.6E-49 20 143 IPR003441 No apical meristem (NAM) protein
Mutant Image
nac42 mutant exhibited early senescence.
Subcellular Localization
Localization	nucleus
Evidence	SUBAcon
Pubmed ID	23180787