Basic information
Locus name	AT3G10500
Alias	ANAC053
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Transcription regulation:NAC
Effect for Senescence	unclear
Gene Description	no apical meristem (NAM) family protein
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4):567-85
Gene Ontology	biological process regulation of transcription, DNA-dependent molecular function DNA binding
Sequence	AT3G10500.1 | Genomic | mRNA | CDS | Protein
Mutant information
Mutated 1 Mutant name ntl4-1 Mutant/Transgenic mutant Ecotype Col-0 Mutagenesis type T-DNA insertion_knock out
Mutated 2 Mutant name ntl4-2 Mutant/Transgenic mutant Ecotype Col-0 Mutagenesis type T-DNA insertion_knock out
Mutated 3 Mutant name 35S:NTL4deltaC plants Mutant/Transgenic transgenic Ecotype Col-0 Mutagenesis type transgene
Microarray
Sampling	Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ. Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4)
Comparation	Legends: Col: wild type, indicates the ratio of expression in senescing leaves/green leaves. NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type. D/L: ratio of DARK 5d/control. CD: Cell Death, ratio of starved cell suspension culture/control. Genes showing at least 3 fold (ratio) up regulation during leaf senescence.
Ortholog Group
Ortholog Groups: OG5_139552	Accession Taxon NP_175835 Arabidopsis thaliana NP_176766 Arabidopsis thaliana NP_188400 Arabidopsis thaliana NP_196061 Arabidopsis thaliana NP_566376 ( AT3G10500 ) Arabidopsis thaliana NP_001048559 Oryza sativa Japonica Group NP_001062518 Oryza sativa Japonica Group NP_001063877 Oryza sativa Japonica Group e_gw1.10.139.1 Physcomitrella patens subsp. patens e_gw1.44.97.1 Physcomitrella patens subsp. patens gw1.73.63.1 Physcomitrella patens subsp. patens gw1.8.110.1 Physcomitrella patens subsp. patens 28872.m000248 Ricinus communis 29770.m000336 Ricinus communis 30171.m000407 Ricinus communis 30172.m000206 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR31989 4.3E-122 1 545 No hit NA SUPERFAMILY SSF101941 4.1E-61 7 159 IPR003441 No apical meristem (NAM) protein Pfam PF02365 2.3E-50 9 136 IPR003441 No apical meristem (NAM) protein ProSiteProfiles PS51005 57.9 9 159 IPR003441 No apical meristem (NAM) protein
Mutant Image
nac53 mutant exhibited slightly delay senescence.
Subcellular Localization
Localization	nucleus
Evidence	SUBAcon
Pubmed ID	23180787