Basic information
Locus name	AT1G20780
Alias	SAUL1/AtPUB44
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Protein degradation/modification:U-box
Effect for Senescence	delay
Gene Description	Encodes a protein containing a U-box and an ARM domain.
Evidence	Genetic evidence:Mutant [Ref 1]
References	1: Raab S, Drechsel G, Zarepour M, Hartung W, Koshiba T, Bittner F, Hoth S Identification of a novel E3 ubiquitin ligase that is required for suppression of premature senescence in Arabidopsis. Plant J. 2009 Jul;59(1):39-51
Gene Ontology	biological process protein ubiquitination cellular component ubiquitin ligase complex molecular function protein binding ubiquitin-protein ligase activity
Sequence	AT1G20780.1 | Genomic | mRNA | CDS | Protein
Mutant information
Mutated 1 Mutant name saul1-1 Mutant/Transgenic mutant Ecotype Col-0 Mutagenesis type T-DNA insertion_knock out
Mutated 2 Mutant name saul1-2 Mutant/Transgenic mutant Ecotype Col-0 Mutagenesis type T-DNA insertion_knock out
miRNA Interaction
Details	target: AT1G20780.1  miRNA: ath-miR775 miRNA: ath-miR775 mfe: -34.7 kcal/mol  p-value: 0.000800  position:  1753  target 5' G              A C     A 3'             UGGCACUGCUGGAC A UCGGA              ACCGUGACGAUCUG U AGCUU   miRNA  3'                          5'
Ortholog Group
Ortholog Groups: OG5_150074	Accession Taxon NP_001077833 Arabidopsis thaliana NP_177765 Arabidopsis thaliana NP_564125 ( AT1G20780 ) Arabidopsis thaliana NP_001050813 Oryza sativa Japonica Group NP_001066565 Oryza sativa Japonica Group e_gw1.124.14.1 Physcomitrella patens subsp. patens e_gw1.3.441.1 Physcomitrella patens subsp. patens e_gw1.3.442.1 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_900161 Physcomitrella patens subsp. patens 30170.m014229 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description SUPERFAMILY SSF57850 5.6E-23 13 104 No hit NA PANTHER PTHR22849 2.2E-144 23 773 No hit NA Pfam PF04564 5.7E-15 25 98 IPR003613 U box domain SMART SM00504 1.0E-26 26 94 IPR003613 U box domain SUPERFAMILY SSF48371 4.2E-34 112 475 IPR016024 Armadillo-type fold SMART SM00185 68.0 133 173 IPR000225 Armadillo SMART SM00185 17.0 175 215 IPR000225 Armadillo SMART SM00185 300.0 301 340 IPR000225 Armadillo SMART SM00185 200.0 341 386 IPR000225 Armadillo SUPERFAMILY SSF48371 6.6E-23 375 519 IPR016024 Armadillo-type fold SMART SM00185 58.0 433 475 IPR000225 Armadillo SMART SM00185 100.0 577 619 IPR000225 Armadillo SUPERFAMILY SSF48371 6.6E-23 586 618 IPR016024 Armadillo-type fold SUPERFAMILY SSF48371 6.6E-23 650 787 IPR016024 Armadillo-type fold SMART SM00185 0.3 660 701 IPR000225 Armadillo Pfam PF00514 9.8E-6 668 699 IPR000225 Armadillo ProSiteProfiles PS50176 10.0 672 699 IPR000225 Armadillo SMART SM00185 120.0 705 747 IPR000225 Armadillo
Subcellular Localization
Localization	cytosol
Evidence	SUBAcon
Pubmed ID	23180787