Basic information   
Locus name AT3G28210
OrganismArabidopsis thaliana
Taxonomic identifier[NCBI]
Function categoryOthers:zinc finger protein
Effect for Senescenceunclear
Gene Descriptionzinc finger (AN1-like) family protein contains Pfam profile: PF01428 AN1-like zinc finger
EvidenceGenomic evidence:microarray data [Ref 1]
References
1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4):567-85

Gene Ontology
molecular function
SequenceAT3G28210.1 | Genomic | mRNA | CDS | Protein
Microarray   
Sampling Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ.
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4)
Comparation Legends:
Col: wild type, indicates the ratio of expression in senescing leaves/green leaves.
NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type.
D/L: ratio of DARK 5d/control.
Genes showing at least 3 fold (ratio) up regulation during leaf senescence.
Ortholog Group      
Ortholog Groups: OG5_129160
AccessionTaxon
NP_189461 ( AT3G28210 ) Arabidopsis thaliana
NP_191307Arabidopsis thaliana
NP_850358Arabidopsis thaliana
117820Chlamydomonas reinhardtii
NP_001063070Oryza sativa Japonica Group
e_gw1.83.96.1Physcomitrella patens subsp. patens
gw1.325.23.1Physcomitrella patens subsp. patens
gw1.415.9.1Physcomitrella patens subsp. patens
29761.m000413Ricinus communis
29822.m003405Ricinus communis
XP_002954775Volvox carteri f. nagariensis
Cross Link      
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR146778.1E-501159No hitNA
SUPERFAMILYSSF1183103.5E-11655No hitNA
ProSiteProfilesPS510398.01359IPR000058Zinc finger, AN1-type
PfamPF014281.5E-131654IPR000058Zinc finger, AN1-type
SMARTSM001540.01655IPR000058Zinc finger, AN1-type
SUPERFAMILYSSF1183101.1E-1095144No hitNA
ProSiteProfilesPS510398.8100147IPR000058Zinc finger, AN1-type
PfamPF014282.5E-12103142IPR000058Zinc finger, AN1-type
SMARTSM001540.0103144IPR000058Zinc finger, AN1-type
Subcellular Localization   
Localizationnucleus
EvidenceSUBAcon
Pubmed ID23180787