Basic information   
Locus name AT2G19810
OrganismArabidopsis thaliana
Taxonomic identifier[NCBI]
Function categoryTranscription regulation:CCCH
Effect for Senescenceunclear
Gene Descriptionzinc finger (CCCH-type) family protein contains Pfam domain, PF00642: Zinc finger C-x8-C-x5
EvidenceGenomic evidence:microarray data [Ref 1]
References
1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4):567-85

Gene Ontology
molecular function
SequenceAT2G19810.1 | Genomic | mRNA | CDS | Protein
Microarray   
Sampling Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ.
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4)
Comparation Legends:
Col: wild type, indicates the ratio of expression in senescing leaves/green leaves.
NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type.
D/L: ratio of DARK 5d/control.
CD: Cell Death, ratio of starved cell suspension culture/control.
Genes showing at least 3 fold (ratio) up regulation during leaf senescence.
Ortholog Group      
Ortholog Groups: OG5_138490
AccessionTaxon
NP_179571 ( AT2G19810 ) Arabidopsis thaliana
NP_180161Arabidopsis thaliana
NP_194648Arabidopsis thaliana
182666Chlamydomonas reinhardtii
ACO66009Micromonas sp. RCC299
NP_001042276Oryza sativa Japonica Group
NP_001054861Oryza sativa Japonica Group
e_gw1.177.112.1Physcomitrella patens subsp. patens
e_gw1.297.58.1Physcomitrella patens subsp. patens
e_gw1.297.59.1Physcomitrella patens subsp. patens
29983.m003151Ricinus communis
estExt_fgenesh1_pg.C_chr_40664Thalassiosira pseudonana CCMP1335
XP_002947407Volvox carteri f. nagariensis
XP_002958507Volvox carteri f. nagariensis
Cross Link      
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR144939.2E-12111353No hitNA
ProSiteProfilesPS501036.575107IPR000571Zinc finger, CCCH-type
SMARTSM003561.2E-4118144IPR000571Zinc finger, CCCH-type
ProSiteProfilesPS5010312.7119145IPR000571Zinc finger, CCCH-type
ProSiteProfilesPS501036.6153177IPR000571Zinc finger, CCCH-type
SMARTSM003560.5153176IPR000571Zinc finger, CCCH-type