|
Locus name | AT2G37760 |
Organism | Arabidopsis thaliana |
Taxonomic identifier | [NCBI] |
Function category | Redox regulation:Flavonoid/anthocyanin pathway |
Effect for Senescence | unclear |
Gene Description | aldo/keto reductase family protein similar to chalcone reductase [Sesbania rostrata][GI:2792155], and aldose reductase ALDRXV4 [Xerophyta viscosa][GI:4539944], [Hordeum vulgare][GI:728592] |
Evidence | Genomic evidence:microarray data [Ref 1] |
References | 1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJComparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.Plant J. 2005 May;42(4):567-85 |
Gene Ontology | |
Sequence | AT2G37760.1 | Genomic | mRNA | CDS | Protein AT2G37760.2 | Genomic | mRNA | CDS | Protein AT2G37760.3 | Genomic | mRNA | CDS | Protein AT2G37760.4 | Genomic | mRNA | CDS | Protein AT2G37760.5 | Genomic | mRNA | CDS | Protein
|
|
Sampling |
Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ. Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4) |
Comparation |
Legends: Col: wild type, indicates the ratio of expression in senescing leaves/green leaves. NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type. D/L: ratio of DARK 5d/control. CD: Cell Death, ratio of starved cell suspension culture/control. Genes showing at least 3 fold (ratio) up regulation during leaf senescence. |
miRNA Interaction | |
|
Details | | target: AT2G37760.1 miRNA: ath-miR390a miRNA: ath-miR390a mfe: -31.1 kcal/mol p-value: 0.005438
position: 13 target 5' A A 3' GUGCUAUUUCUCC GAGUU CGCGAUAGGGAGG CUCGA miRNA 3' C A A 5'
target: AT2G37760.1 miRNA: ath-miR390b miRNA: ath-miR390b mfe: -31.1 kcal/mol p-value: 0.006293
position: 13 target 5' A A 3' GUGCUAUUUCUCC GAGUU CGCGAUAGGGAGG CUCGA miRNA 3' C A A 5'
target: AT2G37760.2 miRNA: ath-miR390a miRNA: ath-miR390a mfe: -31.1 kcal/mol p-value: 0.005020
position: 21 target 5' A A 3' GUGCUAUUUCUCC GAGUU CGCGAUAGGGAGG CUCGA miRNA 3' C A A 5'
target: AT2G37760.2 miRNA: ath-miR390b miRNA: ath-miR390b mfe: -31.1 kcal/mol p-value: 0.005834
position: 21 target 5' A A 3' GUGCUAUUUCUCC GAGUU CGCGAUAGGGAGG CUCGA miRNA 3' C A A 5'
target: AT2G37760.3 miRNA: ath-miR390a miRNA: ath-miR390a mfe: -31.1 kcal/mol p-value: 0.004699
position: 21 target 5' A A 3' GUGCUAUUUCUCC GAGUU CGCGAUAGGGAGG CUCGA miRNA 3' C A A 5'
target: AT2G37760.3 miRNA: ath-miR390b miRNA: ath-miR390b mfe: -31.1 kcal/mol p-value: 0.005479
position: 21 target 5' A A 3' GUGCUAUUUCUCC GAGUU CGCGAUAGGGAGG CUCGA miRNA 3' C A A 5'
target: AT2G37760.4 miRNA: ath-miR390a miRNA: ath-miR390a mfe: -31.1 kcal/mol p-value: 0.005487
position: 21 target 5' A A 3' GUGCUAUUUCUCC GAGUU CGCGAUAGGGAGG CUCGA miRNA 3' C A A 5'
target: AT2G37760.4 miRNA: ath-miR390b miRNA: ath-miR390b mfe: -31.1 kcal/mol p-value: 0.006348
position: 21 target 5' A A 3' GUGCUAUUUCUCC GAGUU CGCGAUAGGGAGG CUCGA miRNA 3' C A A 5'
target: AT2G37760.5 miRNA: ath-miR390a miRNA: ath-miR390a mfe: -31.1 kcal/mol p-value: 0.005462
position: 13 target 5' A A 3' GUGCUAUUUCUCC GAGUU CGCGAUAGGGAGG CUCGA miRNA 3' C A A 5'
target: AT2G37760.5 miRNA: ath-miR390b miRNA: ath-miR390b mfe: -31.1 kcal/mol p-value: 0.006320
position: 13 target 5' A A 3' GUGCUAUUUCUCC GAGUU CGCGAUAGGGAGG CUCGA miRNA 3' C A A 5'
|
|
Ortholog Group | |
|
Ortholog Groups: OG5_126583 | |
Cross Link | |
|
|
|
Localization | cytosol |
Evidence | SUBAcon |
Pubmed ID | 23180787 |